Lactobacillus helveticus H10: LBHH_0226
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Entry
LBHH_0226 CDS
T01959
Name
(GenBank) DNA-directed RNA polymerase sigma subunit RpoE
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lhl
Lactobacillus helveticus H10
Pathway
lhl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBHH_0226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhl03021
]
LBHH_0226
03400 DNA repair and recombination proteins [BR:
lhl03400
]
LBHH_0226
Transcription machinery [BR:
lhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBHH_0226
DNA repair and recombination proteins [BR:
lhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBHH_0226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF5611
DUF3632
Motif
Other DBs
NCBI-ProteinID:
ADX69462
UniProt:
F0NUP1
LinkDB
All DBs
Position
240083..240637
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AA seq
184 aa
AA seq
DB search
MGLDKFKDKNRDELSMIEVAQAILEDNGKRMAFADIVNAVQKYLNKSDEEIRECLPQFYT
DMNTDGEFISMGENVWALRTWFPYESVDEEVNHPEDEEEDDARKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDATADDSDDDYGDDDSEYDEDNDNTDDVLPDGIEGQLSQLNDDDD
EEDN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaaccgcgatgaattatcaatgatcgaagttgca
caagcaattttggaagataatggtaagagaatggcatttgctgatattgttaatgccgta
caaaaatacttgaataagagtgacgaagaaattcgtgaatgtttaccacaattttataca
gatatgaatactgatggtgaatttatctctatgggtgaaaatgtatgggcacttcgtact
tggttcccatatgaatcagttgacgaagaagttaaccacccagaagatgaagaagaagac
gatgcacgtaagcaccataagaaggttaacgcattcttagcaagcgcaactggtgatgat
gacattattgactacgataatgatgatccagaagacgatgatttagacgctactgctgac
gatagcgatgacgattatggtgatgatgattctgaatatgacgaagacaatgacaatact
gatgatgtattgccagacggaattgaaggtcaattatcacaattaaacgatgatgatgac
gaagaagataattaa
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