Paucilactobacillus hokkaidonensis: LOOC260_105550
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Entry
LOOC260_105550 CDS
T03598
Symbol
rpsE
Name
(GenBank) 30S ribosomal protein S5
KO
K02988
small subunit ribosomal protein S5
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LOOC260_105550 (rpsE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lho03011
]
LOOC260_105550 (rpsE)
Ribosome [BR:
lho03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LOOC260_105550 (rpsE)
Bacteria
LOOC260_105550 (rpsE)
Archaea
LOOC260_105550 (rpsE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
BAP85112
UniProt:
A0A0A1GS47
LinkDB
All DBs
Position
568862..569362
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AA seq
166 aa
AA seq
DB search
MAFIDPSKLDLEDNVVSINRITKVVKGGRRLRFAALVIVGDKKGHVGFGTGKAQEVPEAI
RKAVEAAKKNLIEVPIVGTTLPHRVLGVYGGGRIMLKPAVEGSGVAAGGAVRSVMELAGV
ADVTSKRLGSNTPVNVVRATFEGLKELKNAETVSGLRGVSLEHLAQ
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcatttattgacccatcaaaattagatcttgaagataacgttgtttcaatcaaccgg
atcactaaagttgttaaaggtggacgtcgtcttcgttttgccgcattagtaattgtcggt
gataaaaagggccacgttggctttggtacaggtaaagcacaagaagttcctgaagcgatt
cggaaagctgttgaagccgcaaagaagaacttgatcgaagttccaattgttggcacaacc
ttaccacaccgagttcttggcgtttatggcggtggccgaatcatgttgaagcctgccgtt
gaaggttctggtgttgccgctggtggtgctgttcgttccgtgatggaattggctggcgtt
gctgatgtaacatcaaaacgtttaggttctaatactcctgttaatgttgttcgtgcaaca
tttgaaggcttaaaagaacttaagaatgcagaaacagtttcaggtctacgtggcgtttca
ctcgaacatttagcacaatag
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