Paucilactobacillus hokkaidonensis: LOOC260_110300
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Entry
LOOC260_110300 CDS
T03598
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOOC260_110300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_110300
Enzymes [BR:
lho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOOC260_110300
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOOC260_110300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
PIF1
T2SSE
DAP3
AAA_30
ADDB_N
AAA_19
zinc-ribbons_6
UvrD-helicase
SLFN-g3_helicase
TrwB_AAD_bind
DUF643
PCMT
DUF5839
NACHT
zf-ISL3
Motif
Other DBs
NCBI-ProteinID:
BAP85569
UniProt:
A0A0A1GXE9
LinkDB
All DBs
Position
1015812..1018226
Genome browser
AA seq
804 aa
AA seq
DB search
MAQMAQIIVDVPTMQTNQPYTYRIPDELTDQIKPGMRVVVPFGRGSRKVQGFVVGLDEQV
DFDGTLKSIDSLLELHPVLNEELLQLAQWLAKKTFAFQITCMFTMLPNVMRSKTKRFLHL
IDEVDEQTLFDLFNGQNEILFEPDQLDAKTLSQLLKLKREGKVEVTYQVANRAKAKTMLG
ITPKLSFEQYEEIRATLPHNAHSQNKLLSYLQSILNTTVKIADAEQQSDLKANIFTTGEH
KGWLTKDPVEVYRSPSSKDKTRDHPFELNHHQAIAVEKISHAVNNDQAETFLLEGVTGSG
KTEVYLQSIAQALNKGKTAIMLVPEISLTPQMVTRVKQRFGSAVAVLHSGLSNGEKYDEW
RRIEKGEAQVVVGARSAVFAPLKNIGLIIMDEEHETSYKQDETPRYHARDVALWRSKYHG
APLVLGSATPSLESRARAQKGVYQQLLLPDRINEQPLPIVSVVDMRKELRQHAESNFSTD
LLDALNDRLARGEQSILMLNRRGYSSFIMCRDCGFVLKCPNCDISLTLHMDTHTMKCHYC
GHEEPIPRQCPNCHSAKIRYYGTGTQKVQAELEQKIPAANVLRMDVDTTRRKGMHEKILK
QFGNHEADILLGTQMIAKGLDFPDVTLVGVLNADTGLGLPDFRASEHTFQLLTQVSGRAG
RADKKGEVIVQTFNPDHYAIKLAQTQNFEKFFKLEMDLRHRGGYPPYYYTVQVMTSHEKE
AQAAKKMLAITNWLRKRIAPDSIILGPTPQAIARVNRRYYYQIVIKYKQDQNIQSALTEM
MQSVQKLSGQGFQISIDAEPQHFM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatggcgcaaattattgttgatgttccaaccatgcaaaccaatcagccatat
acctatcgaataccagatgagcttactgaccaaattaagcctggaatgcgggtagtggtt
ccatttggccgaggaagtcggaaagtacaaggcttcgtggtgggattagatgagcaggtt
gattttgatgggacgttaaagtcgattgattcactgttagaattacaccctgtgctaaac
gaagaattattacaattagcccagtggttggccaaaaagacatttgcatttcaaattaca
tgcatgtttacaatgctaccaaatgtgatgcggtcaaagactaagcgttttttacattta
attgatgaagtggacgaacaaacattgttcgatttatttaatggccaaaacgaaatttta
tttgaaccagatcaattagatgctaaaacgttgagtcagttactgaagctgaagcgagaa
ggcaaagttgaagttacctatcaagttgccaatcgtgccaaagcaaaaacaatgctcggg
atcactcctaagctttcatttgaacagtatgaagaaatccgggcaacgttgccacataat
gctcactcgcaaaacaaattattgtcttacttacaaagtattttgaatacaaccgttaaa
attgcagatgctgagcaacaaagtgatttaaaagcgaatatatttactactggtgaacat
aaaggttggttaacaaaggatccagttgaggtttatcgttcaccaagcagtaaagataaa
actagagatcatccgtttgaattgaatcaccatcaagcaattgcagttgaaaaaattagt
cacgcggttaataatgaccaggctgaaacatttttgcttgaaggagtaaccggtagtggt
aaaactgaggtttacttacaaagtattgcgcaggctttaaataagggcaaaacagcgatc
atgttggtaccagaaatttccttaaccccgcaaatggtgacacgtgttaagcagcggttt
ggttctgccgtggcagttttacatagtggcctgtccaatggtgaaaaatacgatgaatgg
cgccggatcgaaaagggcgaagctcaggtagtagttggtgcccgctcggccgtatttgca
ccgcttaaaaatattggtttaatcatcatggatgaagaacacgaaacaagctataaacaa
gatgaaacaccgcggtaccatgctcgtgatgtagcgctttggcgcagtaaatatcatgga
gcgccattagtgttaggaagtgcaactcccagtttggaatctcgagcgcgggcgcaaaag
ggtgtttaccaacagttattattgccagatcgaattaatgaacagccattaccgattgtt
tctgttgtcgatatgcgtaaagaattacgacaacatgctgaaagtaatttttcgactgat
ttattggatgcactgaatgatcgattagcacgtggcgagcaaagtattttaatgctgaat
cgacgaggttactcttcatttattatgtgtcgagattgtggatttgtattaaagtgtccc
aattgtgatatatcgctgactttgcatatggatacgcatacgatgaaatgtcattattgt
ggtcacgaagagcccattccacgtcaatgcccaaattgccatagtgctaagattcgttat
tatggtactggaacccaaaaagttcaggctgagctagaacaaaagatcccagctgccaat
gtcttgcggatggatgttgatacgactcgccgcaaagggatgcacgaaaagatcctcaaa
caatttggtaatcatgaggctgatattttgttaggaacccaaatgattgctaaaggtttg
gattttccagatgtaaccctggtaggggttttaaatgcggatacaggacttggcttaccg
gattttagagctagtgaacacacttttcagttactgactcaagtgagcgggcgtgctggc
cgcgcggataaaaagggtgaagtaattgttcaaacgtttaatccggatcattacgcgatt
aaattggcgcaaactcaaaatttcgaaaagttctttaaattagaaatggatttaaggcat
cgtggtggttatccgccgtattattacacggtgcaagtaatgacaagtcatgaaaaagag
gcacaagctgccaaaaaaatgcttgcaattacaaattggctcagaaagcggattgcaccg
gacagtatcattttaggtcccacgccgcaggcaattgcacgggttaatcggcgctattat
tatcaaattgtaattaagtataaacaagatcaaaatattcaatcagctttaacagaaatg
atgcaaagtgtacaaaaattaagtggtcagggtttccaaatttcaatcgatgctgagcca
caacactttatgtaa
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