Legionella israelensis: E4T55_08580
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Entry
E4T55_08580 CDS
T05938
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lib
Legionella israelensis
Pathway
lib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E4T55_08580 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lib03021
]
E4T55_08580 (rpoC)
03400 DNA repair and recombination proteins [BR:
lib03400
]
E4T55_08580 (rpoC)
Enzymes [BR:
lib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E4T55_08580 (rpoC)
Transcription machinery [BR:
lib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E4T55_08580 (rpoC)
DNA repair and recombination proteins [BR:
lib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E4T55_08580 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QBS09906
LinkDB
All DBs
Position
1899639..1903883
Genome browser
AA seq
1414 aa
AA seq
DB search
MATLNDDPMKKAPVMSDLLGILKQQGQTEEFDAIKIALASPELIRSWSYGEVKKPETINY
RTFKPERDGLFCAKTFGPVKDYECLCGKYKRLKHRGVICEKCGVELALAKVRRERMGHIE
LASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFEAFVVVDPGMTELEKGQLLNDEVYL
EAMEQYGDEFDARMGAEAIRDLLRDIDLEEEIKTLREELPETTSETKIKKITKRLKLLEA
FYESGNKPEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLN
APDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKR
VDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFSKLEFRGLATTIKAAKKMVEREEP
VVWDILDDVIREHPILLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAYNADFDGDQM
AVHIPLTLEAQLEARSLMMSTNNILSPASGEPIIVPSQDVVLGLYYLTREKINAKGEGKI
FVSAQEAQNFYEAGHLDIHAKIKIRMPAENNSEMKYQLVETTVGRAILADILPKGMSFEQ
INKTMTKKAISKVVDSCYRRFGLKETVIFADQLMYTGFKYATRAGASIGIEDMEIPDDKA
SIIERADNEVREIESQFRSGLVTNGERYNKVIDIWSRTNELVAKSMMAKIATEEVIDRKG
EKIRQESFNPIYMMADSGARGSAAQIRQLAGMRGLMAAPDGSIIETPITANFREGLNVFQ
YFISTHGARKGLADTALKTANSGYLTRRLVDVSQDVVITELDCGTEEGILMQPLIEGGDI
VEPLHERVLGRVVAQDVYLPSEEEPIVKAGTLLDEDWVEHLEKMGIDQVLVRSPINCKTR
FGLCAKCYGRDLARGHLVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASRATAANNIQ
IKNKGIIRLHNIKTVTHENSNLVAVSRSGEVSIVDEYGRERERYKLPYGAVITVQDKAPV
EAGQVIATWDPHTHPVISEVSGYLKFVDLIDGITMNRQTDELTGLSNIVVIDAKQRSTAG
RDLRPMVKLVTKDGEDIFLAGTNVPAQYYLPVDAIINFEDGSLVGVGDIIARIPQERSKT
RDITGGLPRVADLFEARKPKDSAVMAEVSGLINFGKETKGKRRLIITESEENAYEELIPK
WRHISVFEGEHVERGEVIADGPLNPHDILRLLGVGALANYIVNEVQDVYRLQGVKINDKH
IEVIVRQMLRKRIITDPGDSKFLIGEQIEESVMLQENDKLIENNKQPAEGTPILLGITKA
SLATESFISAASFQETTRVLTEAAVSGKVDELRGLKENVMVGRLIPAGTGFTYHQGRKAK
RARAAGSEHISHTVSASDVEHALSEALNADNSDH
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
ttggctactctaaacgacgatccaatgaaaaaagcacccgtaatgagtgatttattgggt
attttaaaacagcaaggacaaactgaagaatttgatgccattaaaattgcactggcatct
cctgagctaatacgttcctggtcatatggagaggtaaaaaagccggaaacgattaattac
cgaacctttaagccagagcgcgatggtctcttctgtgccaaaacatttggcccggtgaaa
gattatgagtgcctgtgcggaaagtataaacgcttgaagcatcgtggtgttatctgcgaa
aaatgtggtgtggagttggctctcgctaaagtgcggcgtgagcgcatgggccatatagaa
cttgccagcccggttgcccacatttggtttctcaaatctctaccgtcaagaatcggattg
ctgctggacatgacgttaagagacattgaacgtgttttgtattttgaagcgttcgttgtt
gttgatcctggaatgactgagcttgaaaaaggtcaattgctcaatgatgaagtctatctt
gaagccatggagcagtatggcgatgaattcgacgcaagaatgggagcagaggctattcgt
gatttgcttcgagatatcgatctggaagaagagattaagacacttcgtgaggaattaccg
gaaaccacttctgaaaccaaaatcaaaaaaattaccaaacgacttaagctcttggaagcc
ttttatgagtctggtaataaaccagagtggatgatcatggatgttcttccagttcttccg
cccgatttacgaccattggttcctttagatggtggccgatttgctacttctgatttaaac
gatttatatcgcagagtgattaatcgtaataatcggttaaagcgactgcttgacttaaat
gcccctgacattatcgtaagaaacgaaaaacgtatgcttcaggagtctgttgatgccctg
ctggataatggacgtcggggcagagcgattaccgggacaaacaagcgtcctttgaaatcc
ttggctgatatgatcaagggtaaacaaggtcgtttcagacaaaatcttctgggtaaacgc
gtagattattcaggccgttccgttattgtggtcggacctacattacgtttgcatcagtgc
ggcttacctaaaaaaatggctttggaattgtttaaaccctttattttcagcaagctggag
ttcagaggacttgcaacaaccattaaagctgcgaaaaaaatggttgagcgtgaagaacct
gtggtttgggatatccttgatgatgttattcgcgagcatcctattttgctaaaccgtgct
ccaaccttacatcgtttgggtatccaggcttttgagcctgttctggttgaaggaaaggcc
attcaactgcatccactggtgtgtactgcatacaatgctgactttgatggtgaccagatg
gctgtgcatatccctctgactttagaggcacagttggaagctcgttcgttaatgatgtct
acaaataatattttatcaccagccagcggtgagcctattattgttcccagccaggatgtg
gttctaggattatattatctgacccgggaaaaaattaatgccaagggtgaaggtaaaatc
tttgtcagtgcccaggaagcacaaaatttctatgaggccgggcatttggatattcatgca
aagataaaaatccgcatgcctgctgagaacaacagtgagatgaaatatcaattggttgaa
accactgttggacgcgccatacttgccgatatcctgccaaaaggaatgtcttttgaacag
attaacaaaacgatgactaaaaaagccatttctaaggttgtagacagttgttatcgtcgt
tttggtcttaaggaaacggttatttttgctgaccaattaatgtatacaggttttaaatat
gccacacgagctggtgcttccattggcatagaagatatggaaattccagatgataaagcc
agcattatcgagcgagctgataatgaggtcagagaaattgaatcacaatttcgctcagga
ttggttacaaatggtgaacgttataataaagtcattgatatttggtcaagaacgaatgaa
ttagttgcaaaatcaatgatggctaaaattgccactgaagaagttattgatcggaagggt
gaaaaaataagacaggaatcatttaatccaatatacatgatggctgactcaggtgccaga
ggttcagccgcccagatcaggcagttggcaggaatgcggggattaatggctgcgcctgat
ggctcgattattgaaacacctattacggctaatttccgcgagggtttgaatgtattccaa
tactttatttctacccacggagctagaaaaggtcttgccgatacagctttaaaaacagca
aactctggttatctgacacgacgtttagtcgatgtctctcaagatgttgttattactgag
ttggattgtggtacagaagaaggtatattaatgcagccactcattgaaggcggcgatatt
gttgaaccacttcacgagagggttttaggtcgggttgttgcacaggatgtttatcttcca
tccgaagaagagccgattgtcaaagcaggaactttgctggatgaagattgggtagaacat
cttgaaaaaatgggtattgatcaagtgttggttcgctcaccgattaattgtaaaactcga
tttggattatgtgccaagtgctatggaagagacttggcgcgaggacatttagttaatacc
ggtgaggctgttggaattatagcagcacaatccattggtgagcctggaactcagctcacc
atgcgtacattccacattggaggcgcagcttcaagagcaacggctgcaaataatattcaa
attaaaaataaaggaattatacgcctgcataacatcaaaacggttactcatgaaaatagt
aacttagttgctgtttctcgctcgggcgaggtatctattgttgatgaatatggacgtgaa
agggaacgttataagcttccttacggtgcggtgattaccgttcaggacaaggcccctgta
gaggctggacaagttattgcaacctgggatcctcatacccatccagttatttccgaggtg
agcggttatctgaaatttgtagatttaatcgatggcatcaccatgaaccgtcaaaccgat
gaattaaccggtttaagcaatattgtggttatagatgctaaacagcggagcacagccggt
cgtgatctacgcccgatggtcaagctggtaactaaagatggagaagatatatttctggct
ggaaccaatgttcctgcgcaatattatctgcctgtggatgccatcattaactttgaggat
ggctcattggttggcgtaggtgatattattgcacgtataccacaagaacgttctaaaacc
cgtgatattaccggaggtctgccgcgtgttgctgatctctttgaagcaagaaagccaaag
gattctgcggtaatggcagaagtatcagggctgattaattttggtaaagaaacaaaaggc
aagcgcagattaattattactgaatctgaagaaaacgcttatgaggagttaataccaaaa
tggcgccatatatctgtgtttgaaggtgaacatgtggaacgaggtgaggttatcgctgac
ggcccattaaatccacatgacatattgcgtcttttgggtgtaggagctctggccaactat
attgttaatgaagttcaagacgtttatcgccttcaaggtgtaaaaattaatgataagcat
attgaagtcattgttcggcagatgttacgaaaaagaataattactgatcccggtgattca
aaattcctgataggcgagcagatagaagaaagtgtcatgttacaggaaaatgacaagcta
atagaaaacaataaacaaccagcagaaggcacccccatcttgctgggtattactaaagct
tcattagctacagaatcctttatttcggcagcttccttccaggaaacaacacgggtactg
accgaagcggcggttagtggtaaagtcgatgaattacgcggcttgaaagaaaatgtgatg
gtagggcgtttgatccctgcgggaacaggttttacttatcatcaaggccgaaaggctaag
cgtgcaagggcagcaggtagtgagcacatctcacatactgtatctgccagtgatgttgag
catgcattaagtgaagcacttaatgctgataacagcgatcactga
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