Leptospira interrogans serovar Copenhageni: LIC_12688
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Entry
LIC_12688 CDS
T00166
Symbol
recC
Name
(GenBank) exodeoxyribonuclease v gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LIC_12688 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lic03400
]
LIC_12688 (recC)
Enzymes [BR:
lic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LIC_12688 (recC)
DNA repair and recombination proteins [BR:
lic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIC_12688 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAS71246
UniProt:
Q72NZ0
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All DBs
Position
I:complement(3260005..3263403)
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AA seq
1132 aa
AA seq
DB search
MSITHITSLSLEDITSELSQNILKERKNFPLRSITIVVPSVNMRSWLNLNLARISGLCAN
LRFLFLEKALEEYFHFRAGLDYDPFQRTFPSQDAIQRKILTFLIENLNSEETKFLGSFLE
SIPRAFSLSAKLTSLYKDYELNRSSWIQSWANEKGLDIPSISHRPTPFPKEDEYYLFQKK
LYQKVFLNSNQPSTLIQFFLKEVFKNPRRSPQDSLHLFCLSNLADTYLGILESISKKDKL
PIYLYQFHTGASTKTESLGPQRWSNPQIHISSKIVSIPGTISKNLEDTRIYPEKLSALKN
LLKGEIRGHNVENFSGDFSVRFWNAPSSYREIESVANDILYKMNQDRTLTYLDFAVLVTD
MKVYRPAVEWVFDGGILLQTKVDADPIRKKIPYSLTDINANEASLLYRGLMNFWEICSGN
FVRKNDLLKLLRNPLLQKKIRIHSEDVQELEKLIETSGVRYEESGRENDTFQISNGLKRI
RLSSILSQEAAWTKYKISQIPLESEEYSLHLTLFWETVLKVKKDILSFFANETIRWTSEY
LKVVQTSIEELFEFSEEYEQEAKLFHSWLQSLSEWEGIQLQNPEQGISLLKFLTEQVFNQ
IPYRKGAYLTGGVTISLLQPMRPIPFKHIYVLGLGEGKFPGSDDISQLNLRKHFREEWDI
SKREIQEFLLWETIHSAKESITFSYVGKNLQEDKTFEPCSHFLEIMEFLEVKDVVRLPLH
SYSIKYEHTLRELKQGLVSYDFARVWVNGKRKDHPVLDRFQNPDELIKNHSDLSRSTIDV
KELSQFLSDPLDTYLKRKLAMYLEEEYAEENEKEPFYLDAIEETHILKKVHALMIPDLVL
EKPWVWDQEKIVQAVTPILEKEKFSAKFPASVFGKIQEADLVQYLVKTSEHLSEWKPLFQ
GGKYYPYLSLGDTGLPDAICKKLPALKVPLESGDFFLQGEWEHVIEKEGNLYWLFSKSLE
EKPSEDYFGYKDYWKVMSFPFLTGVAFASSNENFKIYSFKPRPSEESKKKNILEFEYDIK
SSSLGMEYLTKIVTEYLKEEPIFFPRRAFLSYYVKNIQVSSGKNKTVEDLSKFEDESVWI
RFLKEELNGIKENLSPLVKLYPKTPELILQSRIRWAKYFYKPLLNWKKIYER
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgatcactcatattacaagtctatctcttgaagatataacttcggaactttctcag
aatatacttaaggaaagaaaaaatttcccacttcgttctattacgatcgtagttccgagc
gtgaacatgaggtcttggttaaatctgaaccttgctcgtatttccggactttgtgctaat
cttagatttttgtttttagaaaaagcgcttgaagagtattttcattttagagcgggttta
gattatgatccgtttcaaagaacgtttccaagtcaagatgcgattcagagaaaaatttta
acctttctaatcgaaaatttaaattctgaagaaactaaatttttaggttcttttttagaa
agtattccgcgcgcgttttctttaagtgcaaaactaacttcgctttataaagattacgaa
ttaaatcgatcttcttggattcagagttgggcaaacgaaaagggtttagatattccttct
atttctcatagaccgacaccgttcccaaaagaagacgaatattatctttttcaaaagaag
ttatatcaaaaagtttttttgaattcgaatcaaccgagtacactcattcaattttttctc
aaagaagtttttaaaaaccctaggcgttcccctcaagattctttacatcttttttgtctt
tctaatcttgcagatacatatttaggaattttagaatccatttctaaaaaggataaactt
cctatttatctctatcaatttcatactggcgcttctactaagacggaatctttagggcca
caaagatggtccaatcctcagattcatatctcttctaaaatagtttctattccaggaact
atttctaaaaatctagaagatactcgtatatatcccgaaaaactttccgcacttaaaaat
ttgctcaaaggagagataagagggcataacgtagaaaatttttcaggggacttttcggtc
cgtttttggaatgctccttcttcctatcgagaaatagaatcggtcgcaaatgatattctc
tataagatgaatcaggatcggacactaacgtatctagattttgcagttttggtcacggat
atgaaggtttatcgtcccgccgtagaatgggtgtttgatggaggaattcttctacaaact
aaagtggacgcagacccgattcgaaaaaaaattccatattctttgacggacatcaacgcg
aacgaagcttctcttttgtatcgaggtttgatgaacttttgggaaatttgttctggaaat
ttcgttcgtaaaaacgatctcttaaaacttcttagaaatcctcttttgcagaaaaagatt
cgtattcattctgaagatgtacaggaactggaaaagctgatcgaaacttctggagtcaga
tacgaagaatccggaagagaaaatgatacattccaaatttcgaatggacttaaaaggatt
cgattgtcttcaattctttctcaagaggccgcttggacaaaatataaaatttctcagatt
cctttggaatctgaagaatattctttgcacctaactcttttctgggaaacggttctcaaa
gtaaaaaaagatattctttctttttttgcaaacgaaacgattcgatggacttccgaatat
ctaaaagtagtacaaacttctatcgaagaactttttgagttctcagaagaatatgaacaa
gaagccaaactttttcacagttggttacaatcgctttctgaatgggaaggaatccaatta
caaaatccagaacaaggaatttctcttttgaaatttctcacggaacaagttttcaatcaa
ataccttatcgtaaaggagcttatcttactggaggagttacgatttctcttttacaacca
atgcgtcccattccttttaaacatatttacgttttaggattgggagaaggaaagtttcca
ggttctgacgatatttcacaattaaatttaagaaaacattttcgagaagaatgggatatt
tccaaaagagaaattcaagaattccttttatgggaaacgattcattctgcaaaggagtcg
atcactttcagttatgtaggtaaaaatttgcaagaggataaaacgttcgaaccttgttct
cactttcttgaaatcatggaatttttggaagttaaggatgttgttcgtcttccattacat
tcgtatagtataaaatacgaacatactcttcgagagttaaaacaaggtttggtgagttat
gattttgcaagagtttgggttaacggaaaacgaaaggatcatcctgttttggatcgattt
cagaatccagacgaactgataaaaaatcattctgatctttctcgttctacaattgacgta
aaagaactttctcaatttttaagcgaccctttggacacgtatctcaaaagaaaactggcg
atgtatttagaagaagaatatgccgaggaaaacgaaaaagaacctttttatttggatgcg
attgaagaaactcatatattaaaaaaagtgcatgcactgatgattccagatctagtttta
gaaaagccttgggtttgggatcaagaaaaaatcgttcaagcagttactccgattttagaa
aaggaaaagttttctgcaaagttccctgcgtccgtatttggaaaaatacaagaagctgat
ttggttcaatatttagtaaaaactagtgaacacctttcggaatggaaacctctttttcaa
ggagggaagtattatccgtatttaagtttaggagatacaggattgccggatgcgatctgt
aaaaaacttcctgccctaaaggttcctttagaatctggtgatttttttcttcaaggagaa
tgggaacacgttatcgaaaaagaagggaatttatactggttgttttctaaaagtttagaa
gaaaaacctagcgaggattattttggttataaggattattggaaggtgatgagttttccc
tttttaaccggagtcgcatttgcatcttctaacgaaaattttaagatctattcttttaag
cctaggccttccgaagaatctaaaaaaaagaatattctagaatttgaatatgatataaaa
agctcttctttgggaatggaatatcttactaaaatagtgacggaatatttaaaagaagaa
cctatcttttttcctcgtagagcatttctaagttattacgttaaaaatatacaagtaagt
tctggtaaaaataaaactgtcgaagacttgtcaaaatttgaagacgaaagcgtttggatt
cgttttcttaaagaagaattgaacggaattaaggaaaacttatctccactggtaaaactg
tatcccaaaacacctgaattaattttacaatcccgaatccgatgggccaaatatttttac
aaacctctcttgaattggaaaaagatttatgaacgttag
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