Leptospira interrogans serovar Lai IPAV: LIF_A0977
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Entry
LIF_A0977 CDS
T01983
Symbol
rpoE
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
lie
Leptospira interrogans serovar Lai IPAV
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lie03021
]
LIF_A0977 (rpoE)
Transcription machinery [BR:
lie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LIF_A0977 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF2802
HTH_38
HTH_24
Phage_antitermQ
Mo-nitro_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AER01780
LinkDB
All DBs
Position
1:1206676..1207296
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AA seq
206 aa
AA seq
DB search
MDSSTKKEQKQIVPKKPTLREIEIGLLKKIKEGDDEAYIQLVSPFRERLYRKAISMVKDG
DDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKSKDMLAKRKRAKENSMDDKEYQ
VTDDRLGFEKKIELSDESNYLISKINGLEDLYKEVIELRYFEEMSYAQIAEVLGTNVGTV
KSRLFKAKEFLKHLILQDGKGEGYFR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggattcttctacaaaaaaggaacaaaaacaaatcgttcctaaaaagcctactttaagg
gagatcgaaattggtctactcaagaagatcaaagaaggggacgatgaagcgtatattcaa
cttgtcagtccgtttcgagaaagactttatcgtaaggcgatttcgatggtaaaagacgga
gacgacgcggaagacattgttcaagacgctctcatttctggttatagatccattcgtaat
tttagggcagattccggagtttacacttggctttatcggattgtagttaacaaatccaag
gatatgttagcgaaacggaaacgagctaaagaaaattctatggatgataaggaatatcag
gtgacggacgatcgattggggttcgaaaaaaaaattgaacttagtgatgagtccaactat
ctaattagcaaaatcaacggcttggaagatctctataaagaggtaatcgaactcagatac
tttgaggaaatgtcatacgcgcaaattgcggaggttctgggaacgaacgtaggaaccgta
aagagcagactctttaaggccaaagaattcctaaaacatttgattctacaagacggtaag
ggtgaaggatactttaggtaa
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