Limnohabitans sp. 63ED37-2: L63ED372_00838
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Entry
L63ED372_00838 CDS
T04121
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lih03016
]
L63ED372_00838 (truA)
Enzymes [BR:
lih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
L63ED372_00838 (truA)
Transfer RNA biogenesis [BR:
lih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L63ED372_00838 (truA)
Prokaryotic type
L63ED372_00838 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
ALK88060
UniProt:
A0A0P0M7V9
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All DBs
Position
complement(869911..870696)
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AA seq
261 aa
AA seq
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MRLALGVCYSGTAYQGWQSQATGLTIQDKLEKALAQFGDVPRISTLCAGRTDAGVHGLMQ
VVHFDTHLERDTHSWVRGTNRYLPSDIAVQWAQVVPETFHCRASATGRRYIYVVLDSIVR
PSLEAGRVGWVYRPLAEAPMREASQHLLGEHDFSSFRASSCQALSPVKTLRHIGITRHGA
YWRFEFEGNAFLHHMIRNIMGCLVTIGQGNQSPDWMREVLRAQSRDAAAPTFSPDGLYFA
GPIYSPEWGLPDTTPAFDWLP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctggccctgggcgtctgctattcgggcacggcttaccaaggctggcaaagtcaa
gccacgggcctgaccattcaagacaaactcgaaaaagcactggcccaatttggtgacgtg
ccccgcatcagcaccttgtgcgcaggccgcaccgatgcgggcgtgcacggcctcatgcag
gtggtgcactttgacacccacctggagcgcgacacccactcttgggtgcgcggcaccaac
cgctatttgccctccgacatcgcggtgcaatgggcgcaggttgtgcccgagaccttccat
tgccgcgccagtgccacgggcaggcgctacatctatgtggtgctggactcgatcgtgcgc
cccagcctggaagcgggccgcgtgggctgggtgtaccgtccgctggccgaagcacccatg
cgcgaagccagccagcatctgctgggtgagcacgatttttcatcgttccgggccagcagc
tgccaagcactgtcgcccgtcaaaaccctgcggcacatcggcatcacccggcatggcgct
tattggcgctttgaattcgagggcaacgcctttttgcaccacatgatccgtaacatcatg
ggctgcctggtcaccatcggccaaggcaaccaatcccccgactggatgcgtgaggtgctg
cgggcccaaagccgcgacgccgcagcgcccacgttttctccagatgggctgtactttgca
gggcccatctacagccccgaatggggcctgcccgacaccacccctgcttttgattggttg
ccatga
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