Limnohabitans sp. 103DPR2: L103DPR2_00247
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Entry
L103DPR2_00247 CDS
T04120
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_00247 (rsmE)
Enzymes [BR:
lim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
L103DPR2_00247 (rsmE)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L103DPR2_00247 (rsmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
HTH_47
Motif
Other DBs
NCBI-ProteinID:
ALK90661
UniProt:
A0A0P0MCF6
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All DBs
Position
complement(283428..284183)
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AA seq
251 aa
AA seq
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MSQLPRFHCPAALHPGDELDLPAGTARHVQVRRMQPGDEITLFNGEGGECVAVITRMGRS
DVGVRVTQRIDTERELAVRVHLWSGITANERMDWLLEKATELGASTLLPITAERSVLKLK
GERADKKLAHWQAIAVAASEQCGRNRVLQVATPLTLSQAITASAQQSNCTRWILSLADGT
KSLQEALQALPTQAAGQALELILLSGPEGGLSPDEEAQALAAGFLPVSLGQRVLRAETAP
VAVLSALGLLT
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaactgccccgctttcactgccccgcagcccttcatcctggcgacgaattggac
ttgcccgcaggcactgcgcggcacgttcaagttcgcagaatgcagcccggtgacgagatc
accttgttcaacggtgagggcggtgaatgtgtggccgtcatcacgcgcatgggccgcagt
gatgtgggcgttcgtgtgacgcaacgcatcgacacagagcgcgagttggctgtgcgtgtc
catttgtggtcgggcatcaccgccaacgaacgcatggactggctgcttgaaaaagccacg
gaattgggcgccagcacgctcttgccgatcacggccgagcgcagtgtcttgaaactcaaa
ggcgagcgggccgacaaaaaattggcgcactggcaagccattgctgtggctgccagcgaa
caatgtggtcgcaaccgtgtcttgcaagtagcgacgccactgactttgtcgcaagccatc
actgcgtcggcgcagcagtccaactgcacacgttggatcttgtccttggccgatggtacg
aaaagcttgcaggaggcgctgcaagccttgccgacccaagcggcaggccaagcacttgag
ctcattcttttgagtggccccgaaggcggcctcagccctgatgaggaagcacaagccttg
gctgcaggcttcttgcctgtgagtttgggtcaacgggtcttgagagccgaaacagcccct
gtcgccgttttgtctgccttgggcttgctgacctag
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