Limnohabitans sp. 103DPR2: L103DPR2_02723
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Entry
L103DPR2_02723 CDS
T04120
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim02024
Quorum sensing
lim03060
Protein export
lim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
L103DPR2_02723 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
L103DPR2_02723 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L103DPR2_02723 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lim02044
]
L103DPR2_02723 (ffh)
Enzymes [BR:
lim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
L103DPR2_02723 (ffh)
Secretion system [BR:
lim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
L103DPR2_02723 (ffh)
Eukaryotic Sec-SRP protein
L103DPR2_02723 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_30
APS_kinase
AAA_16
AAA_22
cobW
AAA_17
AAA_31
AAA_33
AAA_19
Helicase_RecD
GTP_EFTU
ResIII
nSTAND3
AAA_14
AAA_18
Thymidylate_kin
Baculo_PEP_C
AAA_24
TsaE
YqeC
ArsA_ATPase
KTI12
AAA_28
DO-GTPase1
Rad17
Motif
Other DBs
NCBI-ProteinID:
ALK93101
UniProt:
A0A0P0MIJ1
LinkDB
All DBs
Position
complement(2803181..2804578)
Genome browser
AA seq
465 aa
AA seq
DB search
MASALTDKLSQLVKQISGQARITESNVTDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQEVLGSLKPGQALVAIVNRELAATMGEGVADINLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSSPDQKPLDIARAAIDYAR
KHFFDVLLVDTAGRLAIDEALMAEIRELHAALNPVETLFVVDAMQGQDAANTAKAFKDAL
PLTGIVLTKMDGDSRGGAALSVRQITGAPIKFAGTSEKIDGLEVFDAERHAGRILGMGDI
LALVEQVTAGVDMEAAQKLAAKVKSGSGFDLNDFLAQIQQMKQMGGLSSLMDKLPTQLAA
KAGSMDLGKAEKDIARKQGIIHSMTPRERSKPELIKATRKRRIAMGAGVQVQDVNRLLKE
FEQMQDMMKKMSGGGMMKMMKRLGAMKGMGGFGGMGGGGFPGMKR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccctcaccgacaaactctcgcaacttgttaagcaaatcagtggtcaagcg
cggatcacggagtccaatgtcacggacatgctgcgcgaggttcgcatggccttgctggag
gctgatgtggccttgccggtggtgcgcgatttcattgcccgtgtgaaagaaaaagccttg
gggcaagaggtgctgggctccttaaagcctggccaagccttggtggccatcgtgaaccgc
gagttggctgccaccatgggcgaaggtgtggccgatatcaacttggcagcgcaaccgcct
gctgtgattttgatggcaggtttgcaaggtgccggtaaaaccaccaccaccgccaagttg
gccaagcacctgattgaaaagcgcaagaaaaaagtgctgaccgtgtcgggcgacgtgtac
cgacctgcggccattgagcagctgaaaacagtcacagcacaagccggcgccgaatggttc
cccagttcgcctgaccaaaagcctttggacattgcccgtgccgccatcgattacgcacgc
aagcatttctttgatgtgttgctggtcgacacggcaggtcgtttggccattgacgaagcc
ctgatggctgaaattcgggagttgcatgcggctttgaaccctgtggaaactttgtttgtg
gttgatgccatgcaaggtcaggatgcggccaacaccgccaaagcttttaaagatgctttg
cctctgaccggcattgttctgaccaagatggatggcgactcccgaggtggcgcggctttg
tctgtgcgtcaaatcacgggtgcgcccatcaagtttgcaggtaccagcgaaaaaattgac
ggcctcgaagtttttgatgccgagcgacatgcaggccgtatccttggcatgggcgatatc
ttggccttggtggagcaagtcactgccggcgtggacatggaagccgcgcaaaagttggcg
gccaaagtcaagagcggcagcggttttgatttgaatgattttttggcgcaaattcagcaa
atgaagcaaatgggtggcttgtccagtttgatggacaaattgcccacgcagttggcggcc
aaggctggcagcatggatttgggcaaagccgaaaaagacatcgcgcgcaagcaaggcatc
attcacagcatgacaccgcgtgagcgcagtaaacctgaactcatcaaagccacgcgcaag
cgccgcatcgccatgggcgcaggcgttcaagtgcaggatgtgaaccgcttgctcaaagag
tttgagcaaatgcaagacatgatgaaaaaaatgtccggcggcggcatgatgaagatgatg
aagcgcttgggtgccatgaagggcatgggcggctttggcggcatgggcggtggcggtttc
cctggtatgaaacgctaa
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