Limnobacter sp. SAORIC-580: HKT17_09990
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Entry
HKT17_09990 CDS
T06583
Name
(GenBank) choline dehydrogenase
Organism
limn
Limnobacter sp. SAORIC-580
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Lycopene_cycl
NAD_binding_8
DAO
HI0933_like
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QJR30012
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Position
complement(2138168..2139814)
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AA seq
548 aa
AA seq
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MRTFDYIVVGAGTAGALMANRLSANPNNSVLLLEAGGKDNYHWIHIPVGYLYCIDNPRTD
WRFRTEPDAGLNGRALIYPRGKTLGGCSSINGMIYMRGQARDYESWAAQTGDEAWNWNNC
LQDFLAHESNWRYDNPHAELADTDLPKFHSGKGEWRVEKQRLRWEILEAFSQAAQQAGIP
ASDDFNRGNNFGVGYFEVNQRSGWRWNTSKAFLRPIMKRPNLTVWTQAQVKNLIIERNAS
GELVCNGALVVKGGEEVAVKAVRETVLCAGAIGTPQILELSGIGQGSLLQQHGIEVKLDK
PGVGANLQDHLQIRAVFKVQGVKTLNTLANSLWGKAQIGMEYVFKRSGPMSMAPSQLGAF
TKSSADRPYPNIQYHVQPLSLPAFGQPLHNFNAFTASVCNLNPSSRGSVHIKSSRFDEAP
AIAPNYLSTEEDQKVAADSLRVTRNIAQQPALAKYKPEEFKPGVEFQTDEELVRLAGDIA
TTIFHPVGTAKMGAANDPAAVVDSRLRVIGVKHLRIADASVMPTITSGNTNSPTLMIAEK
AARWILEG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcggacttttgattacatcgtagtgggggcgggcacagctggggccttgatggccaac
cggctcagtgccaaccccaacaattcagtgctgttgctggaagcgggcggtaaagacaac
taccactggatccacattcctgtgggttacctgtattgcatcgacaacccccgcaccgat
tggcgctttcgcaccgagcccgatgccggcctgaacggccgcgccctgatttacccccgt
ggcaaaaccttgggtggttgctccagcatcaacggcatgatctacatgcgtggccaggcc
cgcgattatgaaagctgggctgcccaaaccggcgacgaggcctggaactggaacaattgt
ttgcaagattttctagcgcatgaaagcaactggcgttacgacaacccgcatgccgagttg
gctgacacagacttgccaaagtttcacagtggcaagggtgagtggcgcgtggaaaagcag
cgcctgcgttgggaaattctggaagcattttctcaagcggcgcaacaggcaggcataccc
gccagcgacgacttcaaccgtggcaataactttggtgtgggctactttgaagtgaaccag
cgcagcggctggcggtggaacacctccaaagccttcttgcgcccaatcatgaagcggccc
aacttaacagtgtggacccaggcacaagttaaaaatttaatcatcgagcgcaacgccagt
ggcgaactggtgtgcaatggcgcgctggtagtgaagggcggtgaagaagtggcggtgaaa
gccgtgcgtgaaaccgtgctgtgtgcgggtgccattggcacgccacaaattcttgaatta
tcgggcatagggcagggcagcctgctgcagcaacacggtattgaggtaaagctggacaaa
cccggcgtgggtgccaacctgcaagaccatttgcaaattcgcgcagtattcaaagtgcag
ggcgttaaaaccctgaacacactggccaatagcctgtggggcaaggcgcaaattggcatg
gaatatgtatttaagcgcagcggccccatgagcatggccccctcgcaactgggcgcattc
accaaaagcagcgccgaccggccataccccaacattcagtaccatgtgcagccgctgagc
ctgcctgcatttggtcagcccctgcacaacttcaatgccttcacggccagtgtgtgcaac
ctcaaccccagcagccgcggttcggtgcacattaaaagcagtcggttcgacgaagcaccc
gccattgcgccgaattacctcagcactgaggaagaccagaaagtggcggccgattccctc
agggtgacgcgtaatattgcgcagcaacccgccttggcgaaatacaagcctgaggaattc
aagcccggcgtggagtttcaaaccgacgaggaattggtgcgtttggcaggcgacattgcc
acgacgatttttcacccggtgggtacggcaaaaatgggtgcggccaacgaccccgctgct
gtggtcgattcccgcttgcgagtgattggtgtgaagcacctgcgcattgccgatgccagt
gtgatgcccaccattaccagcggcaacaccaacagccccacgctgatgattgccgagaaa
gcggcaaggtggatactcgaaggctga
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