Qingshengfaniella alkalisoli: FPZ52_01135
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Entry
FPZ52_01135 CDS
T06129
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
lit
Qingshengfaniella alkalisoli
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lit03009
]
FPZ52_01135
03016 Transfer RNA biogenesis [BR:
lit03016
]
FPZ52_01135
Enzymes [BR:
lit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FPZ52_01135
5.4.99.29 23S rRNA pseudouridine746 synthase
FPZ52_01135
Ribosome biogenesis [BR:
lit03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPZ52_01135
Transfer RNA biogenesis [BR:
lit03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FPZ52_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QDY70188
UniProt:
A0A5B8IZZ5
LinkDB
All DBs
Position
210811..211458
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AA seq
215 aa
AA seq
DB search
MSSDYNPPQDPLKVLHLDDALIVVDKPAGLLSVPGRGEHLADCLMARLQAAHPEALLVHR
LDRDTSGVMVFARTPEVQRHLGLQFERRHTKKSYVARVWGHVTEKSGTVDLPLIVDWPNR
PLQKVDHENGRSAVTDWKIMRVEGETTRLRLTPHTGRSHQLRVHMKELGYPILGDPFYAT
GPALDAPRLMLHSERLRLRHPDGGEPVTFASKCPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaagcgattacaaccctccgcaggatccgttgaaagtcctgcatctcgatgatgcg
ctgatcgtggtggacaagccagccggcctgttgtcggtgcccgggcgcggtgagcatctg
gccgattgcctgatggcgcgcctgcaggcggcgcatcccgaggcgttgctagtccatcgg
ctggaccgggacacatcgggcgtgatggtcttcgcgcggacccccgaggtgcaacggcac
ctggggctgcagttcgagcggcggcatacgaagaagagctatgtcgcgcgggtctgggga
catgtcaccgagaaatcgggcacggtcgatctgccattgatcgtggactggccgaaccgt
cccctgcaaaaggtggatcacgagaacgggcgctcggcggtcacggactggaagatcatg
cgggttgagggtgaaacaacgcgcctgcgtcttactccccataccgggcggagccatcag
cttcgcgtccatatgaaggaactcggttatccgattctcggcgatccgttctatgccact
gggccggcgctggatgcgccaaggctgatgttgcattccgaacgtctccgcctacgtcac
ccggacggcggcgaacctgtcacctttgcgtcaaaatgtccgttctga
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