KEGG   Lichenihabitans sp. PAMC28606: LGH83_07745
Entry
LGH83_07745       CDS       T07621                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
liz  Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:liz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:liz03400]
    LGH83_07745
Enzymes [BR:liz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LGH83_07745
    5.6.2.6  RNA 3'-5' helicase
     LGH83_07745
DNA repair and recombination proteins [BR:liz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LGH83_07745
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UDL96074
LinkDB
Position
1638886..1641495
AA seq 869 aa
MLDRPAPVTRLPQRFLAWFEARQWSPRPHQLRLLAEAEAGRSALLIAPTGAGKTLAGFLP
SLVDLASAPQDRPASLHTLYISPLKALSVDVARNVEIPVAEMGLGIRVETRTGDTSASKR
QRQRRDPPDILLTTPEQIALLLATADAGPLFKPLRRIVLDEVHALVTSKRGDLLSLGLAR
LRALAPTVQVIGLSATVREPDELRRYISGRDAEATALVIAPEGAKAEIDMLDTRERLPWA
GHGARHAIPEIYTAIRAAKMALLFVNTRFQAEQLFFDLWQVNTDNLPIALHHGSLDVGQR
RRVEEAMSAGRIKAVVCTSTLDLGIDWGDVDLVVNIGAPKGSSRLTQRIGRANHRLDEPS
RALLIPANRFEVLECRAAIEAAAAGVQDTPVPRIGALDVLSQHLLGMACSEPFEADALYA
EVRAAAPYARLSRQDFDDCLSFVATGGYALKAYERFAKIRQTTDGRWRVSNGRIAQTYRM
NVGTIVEATMLKVRLVRGNRKPSIDAGASTTGPVGRGGRVLGEIEDGFLETLVAGDTFLF
AGEILALHSIVENEALVTRSASDTPKIPSYAGGKFPLSTYLAKGVRELLSNPDHWAALPP
QVADWLRLQQVKSTLPPASSLLVETFRRGGRYYLIAYPFEGRLAHQTLGMLLTRRMERAR
LQPLGFVANDYAIAVWCNVDLGARIGHGLVSLDDLFAQDMLGDDLEGWLQESALMKRTFR
QCAIIAGLIERRFPGREKTGRQMTVSTDLVYDVLRRYEPDHVLLRAARDDAATGLLDLAR
LGQLLSRIEGRIIHKNLARISPLAVPIMLEIGREPVYGEAQDAILAEAAEFLVEEASGAD
DGDALPGHRPGPDRPIPGASARPRGWRGY
NT seq 2610 nt   +upstreamnt  +downstreamnt
gtgctcgatcgacctgcccccgttacgcgccttccacaacgcttccttgcttggttcgag
gcgcgccaatggtcgccgcgcccccatcagttgcggttgctcgcggaagcggaagccggg
cgcagcgcactgctgatcgccccgaccggcgccggcaagacgctggcgggatttctccca
agcctcgtcgatctcgcgtcagcgccgcaggatcggcccgcgagcttgcatacgctctac
atctcgccgttgaaggcgctatcggtcgatgtcgcgcgcaatgttgaaattccggtcgcc
gaaatgggccttgggattcgcgtcgaaacgcggacgggggacacgtccgccagcaagcgc
cagcggcagcgtcgcgacccacccgacatcctgctgacgacccccgaacagattgcgctg
ctgctcgccactgcagacgcaggccccttgttcaagccactccgccgcatcgtgctggac
gaagtgcatgcgttggtgacctcgaaacgcggcgatctgctctcgttggggctggcgcgg
ctgcgggcgctcgccccaaccgttcaggtcatcggcctgtcggcgacggtgcgcgagcct
gacgagctgcgacggtatatttcaggccgagacgcggaggctaccgccctcgtgatcgcc
cccgaaggcgccaaggccgagatcgacatgctcgatacgcgggagcggctgccttgggct
gggcatggggcacgccatgccattcccgaaatctatacggcgatccgcgccgccaagatg
gccctgctgttcgtcaacacacgctttcaggccgagcaattgttcttcgacctgtggcag
gtcaacaccgataatctgccgatcgcgctccaccacggttcgctggatgttggccagcgc
cgacgtgtcgaagaggcgatgtcggccggccgcatcaaggccgtggtctgcacctcgacg
ctcgatctcggcatcgactggggagatgtcgacctcgtggtcaatatcggcgcgcccaag
ggatcgagccgcctgacgcagcggatcggccgggccaaccatcggctcgacgagccctcc
cgcgcgctgctgatcccggccaaccggttcgaagttctggaatgccgggccgcgatcgag
gccgcggcggctggcgtgcaggatacgccagtgccgcgcatcggcgcactcgatgtcctc
tcccagcatcttctcggcatggcttgcagcgagccgttcgaggccgacgcgctctatgcc
gaagtgcgcgcggcagcgccctatgctagactatcgcgtcaggatttcgacgactgtctg
tccttcgtggcaaccggcggctacgcgctcaaggcctacgaacgtttcgccaaaatccgc
cagacaacggacggccgatggcgcgtcagcaacgggcgcatcgcgcagacctatcgcatg
aacgtcggcacgatcgtcgaagccaccatgttgaaggtgcggctggtgcgcggcaaccga
aagccgtcgatcgacgccggggcttcgacgaccggcccggtcggacgaggcggacgtgtg
ctcggcgagatcgaggatgggtttctcgagaccctggtggcaggcgacacatttctgttt
gccggcgaaatcctcgcgctgcactcgattgtcgagaacgaggcgctggtgacgcgctct
gccagcgatacaccgaagatcccctcctatgccggcggcaaattcccgctctcgacctat
ttggccaagggcgtgcgggagttgctgtcgaaccccgaccattgggccgccctgccccca
caggtggccgattggctgcggttgcagcaggtgaaatcgacccttccgcctgcgagctcg
ctgctggtcgagacgtttcggcgcggcggccgctattatctgatcgcctatccgttcgag
gggcggcttgcgcatcagacgcttggcatgctgctgacccgccgcatggagcgcgcgcga
ctgcaaccactcggcttcgtggccaatgattatgccatcgcggtctggtgcaacgtcgat
ctcggggcacgaatcggacatggcctggtatcgctggacgacctcttcgcgcaggacatg
ctgggcgacgatctcgagggctggctccaggaatcggcgctgatgaagcggacattccgg
caatgcgccatcatcgccgggctgatcgagcggcgttttcctggccgcgaaaagaccggg
cgccagatgacggtctcgaccgatctcgtctacgatgtgctgcggcgctatgagccagat
cacgtgctgctgcgcgctgcgcgcgacgatgcggcaaccggactcctcgacctcgcccgg
ctcggtcaattattgtcgcgcatcgaggggcgaatcatccataagaacctcgcgcggatc
tcgcctttggcggtaccgatcatgctcgagatcgggcgggagccagtctacggcgaagcg
caggatgccattctggccgaggcggccgagtttttggtggaggaagcctctggtgcggac
gacggcgatgcccttccgggccacagacccggacccgatcgtccgatccccggcgcctct
gcccgccctcgcgggtggcgtggctactaa

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