Lotus japonicus: Lj0g3v0298839.1
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Entry
Lj0g3v0298839.1 CDS
T04348
Symbol
Lj0g3v0298839.1
Name
(Kazusa) -
KO
K11098
small nuclear ribonucleoprotein F
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Lj0g3v0298839.1 (Lj0g3v0298839.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj0g3v0298839.1 (Lj0g3v0298839.1)
03041 Spliceosome [BR:
lja03041
]
Lj0g3v0298839.1 (Lj0g3v0298839.1)
03032 DNA replication proteins [BR:
lja03032
]
Lj0g3v0298839.1 (Lj0g3v0298839.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
Lj0g3v0298839.1 (Lj0g3v0298839.1)
Spliceosome [BR:
lja03041
]
Complex A
U1 snRNP components
Sm proteins
Lj0g3v0298839.1 (Lj0g3v0298839.1)
U2 snRNP components
Lj0g3v0298839.1 (Lj0g3v0298839.1)
Complex B
U1 snRNP components
Lj0g3v0298839.1 (Lj0g3v0298839.1)
U4/U6.U5 tri-snRNP components
Lj0g3v0298839.1 (Lj0g3v0298839.1)
Complex C
U2 snRNP components
Lj0g3v0298839.1 (Lj0g3v0298839.1)
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
Lj0g3v0298839.1 (Lj0g3v0298839.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
LinkDB
All DBs
AA seq
78 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
GEILIRCNNVLYLRGVPE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggcgactataccagttaatcccaagcctttcctgaacaatttgactgggaaaccagtt
attgtgaaacttaagtggggaatggagtacaagggatatcttgtttcagttgattcctat
atgaacttgcagctggccaacactgaagagtacattgagggacagtttactggaaattta
ggagagatattaatcagatgcaacaatgtcctctaccttcgtggagtaccagaa
DBGET
integrated database retrieval system