KEGG   Lotus japonicus: Lj0g3v0327639.1
Entry
Lj0g3v0327639.1   CDS       T04348                                 
Symbol
Lj0g3v0327639.1
Name
(Kazusa) -
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lja  Lotus japonicus
Pathway
lja03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Lj0g3v0327639.1 (Lj0g3v0327639.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj0g3v0327639.1 (Lj0g3v0327639.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     Lj0g3v0327639.1 (Lj0g3v0327639.1)
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95 SecA_PP_bind NusG_II
LinkDB
AA seq 263 aa
MEEQGNTNNNSIKQSNAMNGHVDTSKSDRAVWLMKCPPLVSRSLYAPPSDPSRPVAKVVV
SIDPLNSNDDDSSPQFTMELAGTESGNIPKCYAMDMSKDFIPMSVFSDTQQGKISVEGKI
LNKFDMRPHNQSLELYGKLCRERTNKYMVKNRQIQVIDNDTGAHMRPMPGMISFSVSGPT
DKKKTQAKTTEMKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLC
VYNNKGTNQGTYELKPEYRKSGD
NT seq 792 nt   +upstreamnt  +downstreamnt
atggaggagcaaggaaacaccaacaacaacagcatcaagcagagcaacgccatgaatggc
catgtcgacacctccaaatctgacagagcagtgtggctcatgaaatgtccacccctcgtt
tctcgctccctctatgcccctccctccgacccttcccgccccgtcgctaaggtcgtcgtc
tccatcgaccccctcaactccaacgacgacgattcttctccccagttcacgatggagttg
gctggaactgaatctggaaatatacccaaatgttatgccatggatatgtctaaagacttc
attcccatgtctgtgttttcagacacgcagcaaggaaagatctctgtggagggaaaaata
ctgaacaagtttgacatgaggccccataatcaaagtcttgagctatatgggaaactctgc
cgtgaaaggacaaacaaatatatggtcaaaaatagacagatacaggttattgataatgac
actggggctcatatgaggccaatgccagggatgatcagtttttcggtttctggacctact
gataagaagaaaactcaagccaaaacaacagagatgaagagaacaagaagagaccgtggc
gaaatggaagagattgtgttcaagctatttgaaaggcagcccaattggagtttaagaaac
ctcatacaagaaaccgaccaacctgaacaatttctgaaagatatactgaaagacctatgt
gtctacaataacaaaggaactaatcaaggcacctatgaactgaagcctgaatacagaaaa
tctggcgattaa

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