Lotus japonicus: Lj0g3v0327639.1
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Entry
Lj0g3v0327639.1 CDS
T04348
Symbol
Lj0g3v0327639.1
Name
(Kazusa) -
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Lj0g3v0327639.1 (Lj0g3v0327639.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj0g3v0327639.1 (Lj0g3v0327639.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
Lj0g3v0327639.1 (Lj0g3v0327639.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
SecA_PP_bind
NusG_II
Motif
LinkDB
All DBs
AA seq
263 aa
AA seq
DB search
MEEQGNTNNNSIKQSNAMNGHVDTSKSDRAVWLMKCPPLVSRSLYAPPSDPSRPVAKVVV
SIDPLNSNDDDSSPQFTMELAGTESGNIPKCYAMDMSKDFIPMSVFSDTQQGKISVEGKI
LNKFDMRPHNQSLELYGKLCRERTNKYMVKNRQIQVIDNDTGAHMRPMPGMISFSVSGPT
DKKKTQAKTTEMKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLC
VYNNKGTNQGTYELKPEYRKSGD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaaggaaacaccaacaacaacagcatcaagcagagcaacgccatgaatggc
catgtcgacacctccaaatctgacagagcagtgtggctcatgaaatgtccacccctcgtt
tctcgctccctctatgcccctccctccgacccttcccgccccgtcgctaaggtcgtcgtc
tccatcgaccccctcaactccaacgacgacgattcttctccccagttcacgatggagttg
gctggaactgaatctggaaatatacccaaatgttatgccatggatatgtctaaagacttc
attcccatgtctgtgttttcagacacgcagcaaggaaagatctctgtggagggaaaaata
ctgaacaagtttgacatgaggccccataatcaaagtcttgagctatatgggaaactctgc
cgtgaaaggacaaacaaatatatggtcaaaaatagacagatacaggttattgataatgac
actggggctcatatgaggccaatgccagggatgatcagtttttcggtttctggacctact
gataagaagaaaactcaagccaaaacaacagagatgaagagaacaagaagagaccgtggc
gaaatggaagagattgtgttcaagctatttgaaaggcagcccaattggagtttaagaaac
ctcatacaagaaaccgaccaacctgaacaatttctgaaagatatactgaaagacctatgt
gtctacaataacaaaggaactaatcaaggcacctatgaactgaagcctgaatacagaaaa
tctggcgattaa
DBGET
integrated database retrieval system