Lotus japonicus: Lj2g3v2558970.1
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Entry
Lj2g3v2558970.1 CDS
T04348
Symbol
Lj2g3v2558970.1
Name
(Kazusa) -
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lja
Lotus japonicus
Pathway
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lj2g3v2558970.1 (Lj2g3v2558970.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj2g3v2558970.1 (Lj2g3v2558970.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
Lj2g3v2558970.1 (Lj2g3v2558970.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
LinkDB
All DBs
AA seq
902 aa
AA seq
DB search
MFPVKLAGDETRSPHRPEETLTEISREAVGKLLRRANKVGSSKKKNKPEVEPEINGSQVS
EQILQPQTSEVGHCGGNSIGNVSAEKKRNHVSLGQGFLDEKEELHDSDWEDGAVAMDDRP
VTVELNVTPDSAVRKQIRRASAEDKELAELVHKAHLLCLLARGRLIDSACDDPLIQASLL
SLLPAHLLQLSNVTELTSKALHPLIVWFHDNFHVKNCANEDKSPHFALASALESHEGSPE
EIAALAVALFRALNLTARFVSILDVASIKPVASGSSKGIFSTSTPMISKLKLDFKSPKKS
LSSNEREVVGESSLGRSLKSKKACTTSHMTRSKDPPVAKDLNQSVTNSPTSKAHDNNPES
YAIDKSHKPKRKGDLEYEMQLEMALSATAVECSENKMESGVNAESSNVSCPSKRMKIIKG
EESSTSPQVISTAVGPMKVGSPLYWAEIHSSQENLTGKWVHIDAVNMIIDGEDKVEAMVA
ACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIAPQRVNSTWWDSVLAPLRDLESGATEGVV
LSRTNQIVATEANMMDSSAPSRSSLEDIELETRALTEPLPTNQQAYKSHLLYAIEKWLTK
YQVLHPKGPILGFCSGHPVYPRTCVQTVKTKERWLREGLQVKPNEHPVKVLKCSIKPQKV
QDSEADDNGCSDSKENIKLYGKWQLEPLILPHAVNGIVPKNERGQVEVWSEKCLPPGTVH
LRLPKAFYVAKRLEIDYAPAMVGFEFRNGRSYPVFDGIVVCAEFKDALLEAYAEEEERRQ
ADEKRRDEAQALNRWYQLLSSIVTRQRLNNRYNSHLSSEMPSDVQCMNDNVSNATACGSS
DENQNPRHHQVEKCDADFDASLSTPVKDHEHVFLKEYESFDKGTSLLTKRCQCGFSVQVE
EL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgtcaaactggcaggagatgaaactagatccccgcatcgcccggaagaaaca
ctgaccgaaatatctcgggaggctgtgggaaaacttttacgccgtgctaataaagttgga
tcttccaagaaaaagaacaagcctgaggttgagccagaaataaatggaagtcaagtttcg
gaacaaattcttcaaccacagacttcagaagttggacattgtggtggaaattccattgga
aatgtttctgcagagaagaagcgtaatcatgtaagtttaggccagggcttcttggatgaa
aaggaagaactgcatgactcagattgggaagatggtgcagttgctatggatgatcgtcct
gtgactgttgaattgaatgtgacccctgattcagctgtacggaaacaaatacgtcgagct
tctgctgaagataaggaattggctgaactagtgcacaaggctcatttgctttgtttactt
gctcgtggaagattaatagacagtgcttgtgatgatcctcttattcaggcttctttgctt
tctctacttccagcgcacttgctccagctatcaaatgtcacagagctcacttcaaaagct
ttacatccgttaatagtatggttccatgataatttccatgttaaaaactgtgcaaatgaa
gacaagtcaccacactttgctttggcgtcagctttagaatcacatgaaggtagtcctgaa
gagattgcagctttagcagtggcactatttagagctttaaatcttacagccaggtttgtg
tccattttggatgttgcttctattaaaccagttgcaagtggatctagtaaggggatattt
agtacttctaccccaatgatatctaagctaaaattggatttcaagtcaccgaaaaaatca
ttatcttctaatgagagagaagtagtcggtgaaagttctcttggccgttcattgaaaagt
aagaaagcctgtacaacaagccacatgactcggtctaaagatcctcctgttgctaaagac
ttgaatcaaagtgtgacaaactcgccaacttccaaggcacacgacaataaccctgaatca
tatgccattgacaaatctcataaaccaaagaggaaaggggatcttgaatatgagatgcag
ttggaaatggctctttctgctacagcggttgaatgttcggagaataaaatggagtcagga
gtgaatgctgagtcatcaaatgtttcttgtccatcaaaaaggatgaaaataattaaaggt
gaagaatcttcaacctcccctcaagtaatttcgacggcagttggaccaatgaaagtagga
tcccctctgtactgggcagaaatccattccagtcaagaaaatttgacaggaaagtgggtg
catattgatgctgttaatatgattattgatggagaggacaaggtcgaagccatggttgct
gcgtgcaaaacatctttgagatatgttgttgcttttgctggacagggggccaaagatgtg
acccgcaggtactgtatgaagtggtacaagatagcaccacaacgagttaattcaacatgg
tgggattcagtgttggctccactgagagacttggagtctggcgcaactgaaggtgtggtt
ctttcaagaacaaaccaaatcgttgctacagaagccaacatgatggattcttctgctcct
tcaaggagttctcttgaggatattgagttagaaactagagcattaactgagcctcttcca
accaaccagcaggcctacaaaagtcatctactttatgccatagaaaaatggcttacaaag
tatcaagtacttcatccaaagggtccaattctgggcttttgttcagggcacccagtttac
cctaggacttgtgtgcaaacagttaagacaaaagagagatggctccgggaaggactgcaa
gtgaaacccaatgaacatcctgtgaaggttcttaaatgttccattaagccccagaaagta
caagattctgaagctgatgacaatggctgctctgattctaaggaaaatataaaactttat
gggaagtggcaactggaaccactgattctacctcatgctgtgaatgggattgttcccaag
aatgaacgtggtcaggtagaagtttggtctgagaaatgtcttccgccaggcactgtgcac
ttaaggcttccgaaggccttttatgttgccaagaggctagagattgattatgcgcccgct
atggttggttttgaatttagaaatggccgttcatatcctgtctttgatggtattgtggtc
tgtgctgagttcaaggatgcacttctagaggcatatgcagaggaagaggaaagacgtcag
gctgatgagaagagaagggatgaagcccaagctcttaatcggtggtaccagcttctttca
tccatcgtaactcgtcaaaggttaaataatcgttataacagccatttgtcatcagagatg
ccatctgatgtccaatgcatgaatgataatgtgtcaaatgccacagcttgtggtagttcc
gacgagaatcagaacccaagacaccatcaggtggagaaatgcgatgcagattttgatgca
tcgttaagtactccagtaaaggaccatgagcatgtttttttgaaagagtacgagagcttt
gataagggaacctctctattgaccaagcgatgtcaatgtggattttcagtccaagtagaa
gaattatagtat
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