KEGG   Lotus japonicus: Lj2g3v2558970.1
Entry
Lj2g3v2558970.1   CDS       T04348                                 
Symbol
Lj2g3v2558970.1
Name
(Kazusa) -
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
lja  Lotus japonicus
Pathway
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lj2g3v2558970.1 (Lj2g3v2558970.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj2g3v2558970.1 (Lj2g3v2558970.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      Lj2g3v2558970.1 (Lj2g3v2558970.1)
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
LinkDB
AA seq 902 aa
MFPVKLAGDETRSPHRPEETLTEISREAVGKLLRRANKVGSSKKKNKPEVEPEINGSQVS
EQILQPQTSEVGHCGGNSIGNVSAEKKRNHVSLGQGFLDEKEELHDSDWEDGAVAMDDRP
VTVELNVTPDSAVRKQIRRASAEDKELAELVHKAHLLCLLARGRLIDSACDDPLIQASLL
SLLPAHLLQLSNVTELTSKALHPLIVWFHDNFHVKNCANEDKSPHFALASALESHEGSPE
EIAALAVALFRALNLTARFVSILDVASIKPVASGSSKGIFSTSTPMISKLKLDFKSPKKS
LSSNEREVVGESSLGRSLKSKKACTTSHMTRSKDPPVAKDLNQSVTNSPTSKAHDNNPES
YAIDKSHKPKRKGDLEYEMQLEMALSATAVECSENKMESGVNAESSNVSCPSKRMKIIKG
EESSTSPQVISTAVGPMKVGSPLYWAEIHSSQENLTGKWVHIDAVNMIIDGEDKVEAMVA
ACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIAPQRVNSTWWDSVLAPLRDLESGATEGVV
LSRTNQIVATEANMMDSSAPSRSSLEDIELETRALTEPLPTNQQAYKSHLLYAIEKWLTK
YQVLHPKGPILGFCSGHPVYPRTCVQTVKTKERWLREGLQVKPNEHPVKVLKCSIKPQKV
QDSEADDNGCSDSKENIKLYGKWQLEPLILPHAVNGIVPKNERGQVEVWSEKCLPPGTVH
LRLPKAFYVAKRLEIDYAPAMVGFEFRNGRSYPVFDGIVVCAEFKDALLEAYAEEEERRQ
ADEKRRDEAQALNRWYQLLSSIVTRQRLNNRYNSHLSSEMPSDVQCMNDNVSNATACGSS
DENQNPRHHQVEKCDADFDASLSTPVKDHEHVFLKEYESFDKGTSLLTKRCQCGFSVQVE
EL
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgtttcctgtcaaactggcaggagatgaaactagatccccgcatcgcccggaagaaaca
ctgaccgaaatatctcgggaggctgtgggaaaacttttacgccgtgctaataaagttgga
tcttccaagaaaaagaacaagcctgaggttgagccagaaataaatggaagtcaagtttcg
gaacaaattcttcaaccacagacttcagaagttggacattgtggtggaaattccattgga
aatgtttctgcagagaagaagcgtaatcatgtaagtttaggccagggcttcttggatgaa
aaggaagaactgcatgactcagattgggaagatggtgcagttgctatggatgatcgtcct
gtgactgttgaattgaatgtgacccctgattcagctgtacggaaacaaatacgtcgagct
tctgctgaagataaggaattggctgaactagtgcacaaggctcatttgctttgtttactt
gctcgtggaagattaatagacagtgcttgtgatgatcctcttattcaggcttctttgctt
tctctacttccagcgcacttgctccagctatcaaatgtcacagagctcacttcaaaagct
ttacatccgttaatagtatggttccatgataatttccatgttaaaaactgtgcaaatgaa
gacaagtcaccacactttgctttggcgtcagctttagaatcacatgaaggtagtcctgaa
gagattgcagctttagcagtggcactatttagagctttaaatcttacagccaggtttgtg
tccattttggatgttgcttctattaaaccagttgcaagtggatctagtaaggggatattt
agtacttctaccccaatgatatctaagctaaaattggatttcaagtcaccgaaaaaatca
ttatcttctaatgagagagaagtagtcggtgaaagttctcttggccgttcattgaaaagt
aagaaagcctgtacaacaagccacatgactcggtctaaagatcctcctgttgctaaagac
ttgaatcaaagtgtgacaaactcgccaacttccaaggcacacgacaataaccctgaatca
tatgccattgacaaatctcataaaccaaagaggaaaggggatcttgaatatgagatgcag
ttggaaatggctctttctgctacagcggttgaatgttcggagaataaaatggagtcagga
gtgaatgctgagtcatcaaatgtttcttgtccatcaaaaaggatgaaaataattaaaggt
gaagaatcttcaacctcccctcaagtaatttcgacggcagttggaccaatgaaagtagga
tcccctctgtactgggcagaaatccattccagtcaagaaaatttgacaggaaagtgggtg
catattgatgctgttaatatgattattgatggagaggacaaggtcgaagccatggttgct
gcgtgcaaaacatctttgagatatgttgttgcttttgctggacagggggccaaagatgtg
acccgcaggtactgtatgaagtggtacaagatagcaccacaacgagttaattcaacatgg
tgggattcagtgttggctccactgagagacttggagtctggcgcaactgaaggtgtggtt
ctttcaagaacaaaccaaatcgttgctacagaagccaacatgatggattcttctgctcct
tcaaggagttctcttgaggatattgagttagaaactagagcattaactgagcctcttcca
accaaccagcaggcctacaaaagtcatctactttatgccatagaaaaatggcttacaaag
tatcaagtacttcatccaaagggtccaattctgggcttttgttcagggcacccagtttac
cctaggacttgtgtgcaaacagttaagacaaaagagagatggctccgggaaggactgcaa
gtgaaacccaatgaacatcctgtgaaggttcttaaatgttccattaagccccagaaagta
caagattctgaagctgatgacaatggctgctctgattctaaggaaaatataaaactttat
gggaagtggcaactggaaccactgattctacctcatgctgtgaatgggattgttcccaag
aatgaacgtggtcaggtagaagtttggtctgagaaatgtcttccgccaggcactgtgcac
ttaaggcttccgaaggccttttatgttgccaagaggctagagattgattatgcgcccgct
atggttggttttgaatttagaaatggccgttcatatcctgtctttgatggtattgtggtc
tgtgctgagttcaaggatgcacttctagaggcatatgcagaggaagaggaaagacgtcag
gctgatgagaagagaagggatgaagcccaagctcttaatcggtggtaccagcttctttca
tccatcgtaactcgtcaaaggttaaataatcgttataacagccatttgtcatcagagatg
ccatctgatgtccaatgcatgaatgataatgtgtcaaatgccacagcttgtggtagttcc
gacgagaatcagaacccaagacaccatcaggtggagaaatgcgatgcagattttgatgca
tcgttaagtactccagtaaaggaccatgagcatgtttttttgaaagagtacgagagcttt
gataagggaacctctctattgaccaagcgatgtcaatgtggattttcagtccaagtagaa
gaattatagtat

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