Lotus japonicus: Lj4g3v0451120.1
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Entry
Lj4g3v0451120.1 CDS
T04348
Symbol
Lj4g3v0451120.1
Name
(Kazusa) -
KO
K07456
DNA mismatch repair protein MutS2
Organism
lja
Lotus japonicus
Pathway
lja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lj4g3v0451120.1 (Lj4g3v0451120.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj4g3v0451120.1 (Lj4g3v0451120.1)
DNA repair and recombination proteins [BR:
lja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Lj4g3v0451120.1 (Lj4g3v0451120.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
YscJ_FliF
Motif
LinkDB
All DBs
AA seq
901 aa
AA seq
DB search
MQLSSCNLLFIPAKNPPRFSFKPCFCFNHNSAESNSLQAETLKTLEWSSICKHLSAFTST
SMGSSAANAARLPIGRTPQESQKLLDQTSAARLVTHPPDFTGIHDLTEILTVAVSGQLLT
IPELCTVRRTLTAARELFHNLKHLASASSNPQRYIPLLEILRNCNFQLDLERKIGFCVDC
KLSVILDRASEDLEIIRSERRRNLENLDSLLKEASSQIFRAGGIDRPLITKRRSRMCVGV
RASHRYLLPNGVVLNVSSSGATYFMEPKDAIDLNNMEVRLSNSEKAEERAILSMLASEIA
NSESEINYLLDRILEVDLAFARAAYAGWMNGVCPIFSLGNFEGCDSVEEDDDLTVNIDGV
RHPLLLESSLEKNSDNLTRSGNVAKLGNGNGAVASTNRPQGLSDFPVPVDFKIRHGTRVV
VISGPNTGGKTASMKTLGLVSLMSKAGMHLPAKNSPKLPWFDLILADIGDHQSLEQNLST
FSGHISRICKFLEVASKQSLVLIDEIGSGTDPSEGVALSTSILQYLKDHVNLAVVTTHYA
DLSNLKEKDTSFDNAAMEFSLETLEPTYRILWGCTGDSNALSIAQSIGFDRNVINHAQKW
VEKLKPEQQQERRGILYQSLQEERNRLKAQAEKAAYIHKEIMDVYREIQGEAEDLDRREM
ELMAKETQQVQQELEDAKSQMETTIQKFEKELRVSGRDKLNSLIRESESVIASIVKSHTP
PDSFPVSEADHGSYAPQFGDQVRVKGLGGKLATVVELPGDDEAILVQYGKVKVRVKKSSI
IAIPSSAKNAVTSSSTNQGRQKAQHRGNLDVNSNDDLPYGPVVRTSKNTVDLRGMRVEEA
SIHLEMAINASRPYSVLFVIHGMGTGAIKERALEILQSHARVSNYEPENPMNYGCTIAYV
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcagcagctgcaacctcctcttcattccggcgaagaaccccccacggttttca
ttcaaaccctgcttctgcttcaaccataactcggccgagtcaaactcactccaagccgag
accctcaagacactggaatggagctccatatgcaagcacctctctgcattcacctccacc
tccatgggctcctccgccgccaacgccgcccgtttgcccatcggacggacccctcaggag
agccagaagcttctcgaccagacttccgccgccagactcgtcactcatccgcctgacttc
accggaatccatgacttgacggagattctcactgttgctgtctccggtcagctgctaacc
atcccggagctttgcaccgttcgccgcacgcttactgccgccagagaattgttccacaat
ttgaaacacttggcttctgcttctagtaatccacaaaggtacataccccttcttgaaata
ctgcgtaattgtaattttcaactggacttggagcgtaaaataggattttgcgtagattgc
aagctttcagtaattcttgatagagcaagtgaagacctggagatcattagatcagaaaga
aggaggaacctagaaaatttggattctttattgaaggaagcatcatctcaaatcttccgg
gctgggggcattgacagaccattaataactaagcgtcgatctagaatgtgtgtcggtgtt
agggcttcccatagatacttgcttccaaatggggttgttctgaatgttagcagttctgga
gcaacatactttatggaacccaaagacgcaatagatctgaacaacatggaagttaggctt
tcgaactccgagaaggctgaggaaagagctatcttgagtatgcttgcatctgaaatagca
aattcagaatcagagataaactatttattggatagaattcttgaggttgatctcgctttt
gcaagagctgcctatgctggatggatgaatggggtgtgtccaatttttagtttaggtaat
tttgaaggctgtgattcagttgaagaggatgatgatttaacagtaaatattgatggtgta
cgacatccattacttctggagtcctccctagaaaaaaattcagataatcttacaagatct
ggaaatgttgcgaagttggggaatggaaacggagcagtggcttctacaaatagaccacaa
ggcttatcagacttccctgtgccagttgactttaaaattagacatggaactagagtggtg
gtgatctcaggacctaatactggagggaaaactgcttccatgaaaacattgggcctggtg
tcacttatgtcaaaggctggaatgcacctgcctgccaagaacagtccaaaacttccttgg
tttgaccttatccttgcagatattggagatcatcagtcccttgaacaaaacctctcaact
tttagtgggcacatctcacgtatttgtaagtttttggaagtggcctcaaaacaatcactt
gttctcattgatgaaatcggcagtggaactgatccatcagaaggtgtagctctttctacc
agtatcttacaatatttaaaggatcatgttaacttggctgttgtgaccactcattatgct
gatctaagtaatttgaaggaaaaggataccagttttgacaatgcagcaatggagttttca
cttgaaacattagaaccaacttataggatcctttggggatgtactggtgattcaaatgcc
ttaagcatagcacaatctattggcttcgatagaaatgtaattaatcatgcccaaaaatgg
gtagagaagttaaaaccagaacagcagcaagagcgaagaggaatactgtatcagtcattg
caggaggaaagaaaccgattaaaggcccaggctgaaaaggctgcatacattcataaagaa
atcatggacgtataccgtgagatccaaggggaggcagaagaccttgatagacgagagatg
gaacttatggcaaaggaaactcagcaggtccaacaagagctagaggatgcaaaatctcag
atggaaacaacgatacagaaatttgaaaaggaactcagagtctctgggcgtgataaactc
aattcacttattagagaatctgaatctgtgattgcctccattgtaaaatcccatactcct
cctgatagttttcctgtcagtgaagctgatcacggttcatatgctccacaatttggcgac
caagttcgtgtaaagggattgggagggaaattagccacagtggttgagttgcctggggat
gatgaggcaatcctggtacagtatggtaaagtgaaagtccgtgtgaaaaaaagtagcatc
atagctattccatccagtgcaaagaatgctgtaactagttcttccacaaatcaggggagg
cagaaagcacaacacaggggtaatttagatgtcaacagcaatgatgatcttccatatggt
ccagtggtgcgaacatctaagaatactgtggatcttcgcggtatgcgagtggaagaagct
tctatccaccttgagatggcaattaatgcaagtcgaccatattcggttctctttgtgata
catgggatgggcactggcgctattaaggaacgtgcgcttgagatcttacagagtcatgca
cgtgtttctaattatgagcctgaaaatccaatgaattatggttgtaccattgcctatgtc
aagtga
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