Lotus japonicus: Lj4g3v1259080.1
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Entry
Lj4g3v1259080.1 CDS
T04348
Symbol
Lj4g3v1259080.1
Name
(Kazusa) -
KO
K20353
COPII coat assembly protein SEC16
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
Lj4g3v1259080.1 (Lj4g3v1259080.1)
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Lj4g3v1259080.1 (Lj4g3v1259080.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
LinkDB
All DBs
AA seq
1398 aa
AA seq
DB search
MASNPPFHVEDQTDEDFFDKLVEEDMSPVKSGSNDSDDVKAFANLGIGNDADADADAGAD
AAFDHSGGGGSGVELKGEEEEDGAVKLDGGNSQEGGSFLVSSSESGCDSVMDRGGDNAVG
SEVGPDLSVGKSNGMHNSGIKVVDWNAFNAADSNGGTGFGSYSDFFTEFEDQSGKGFHDS
NKTEVKPGNEIANDSLDASANYVQYQDGQGYDASTGNGISEQQDPNSSQYWESLYPGWKY
DHNTGQWYQVDDPNATATTQGGSDASTGVGWTAAADAKAEVSYLQQTPQSVAGTLAETGT
TESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNSSIQSATQGLQNGN
ASTSSFAHNGNNFYGEYGQAGNYEPQGISSQAANDSWGGSYGISHQQGLETSTTQSAIRS
GDSATSGGNQQYDHPFGSSISFNRDQQNTSSSFGSVPSYNKANPDHGLANGTLEVQNFAP
SGNYGQHFNYSNTQFDEQKKFSNDYADSQKPLSYSRQSFQGGHQQSYAPNVGRSSAGRPP
HALVTFGFGGKLIVMKDSNLLSSPYESQSSVQGSVSVLNLMEVVAGSIDSSSIGNGACDY
FRALSQQSFPGPLVGGSVGSKELHKWIDERITHCGSPDMDYKKGEKLRLLLSLLKIACQH
YGKLRSPFGTDNILKENDNPGSAVAKLFASAKMSGKEFTQYGVLSHCLQNLPSEAQMRAT
ASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQLGEQFYVDTVKQMSLRQLVAGSPLR
TLCLLIAGQPAEVFSSDSSTSGDPSAFDMPQQHVQFGSNGMLEDWEENLAVITANRTKDD
ELVIIHLGDCLWKERSEITAAHICYLIAEANFESYSDSARMCLIGADHWKFPRTYASPDA
IQRTELYEYSKVLGNSQFILLPFQPYKIIYACMLAEVGKLSDSLKYCQAVLKSLKTGRAP
EAETWKQLISSLEERIRAHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVGGLPPPAPSSS
QGTAQGNEQTFQTTAHRVSNSQSTMAMSSLVPSASMEWTADNNRTTKPNRSASEPDFGRT
PRQGKSPDSGATSRFSRFGFGSQLLQKTVGLVLRPRPGKQAKLGEKNKFYYDENLKRWVE
EGAELPAEETALPPPPTTTVFQNGSTDYNLKSALKTEVSPSNEGSDLKTSSPELTPGIPP
IPPSTNQFSARGRLGVRSRYVDTFNQGGGSSANLFQTPPVPSVKPAVTANAKFFIPAPAP
SSSEQTMEAIAENNQEDSSALENPSTSSRNDWAYLSPKTPSPMARQRFPSMGNIPSPGAM
INGSNSHHTHTSPHSRRTASWSGGSYGDSFYPTTKMNEAKPLGEALGMPPSTFMPDDASL
MHTPVKSGSFGDLHEVEL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttcatgtggaggatcagacggatgaggatttttttgataaa
ttggttgaggaggatatgagtcctgtcaaatctggaagcaatgactctgatgatgtcaag
gctttcgccaatttgggtatcgggaatgatgctgatgctgatgctgatgctggtgccgat
gcggcatttgatcattcgggtggtggaggaagtggggtggagttgaaaggggaggaggag
gaagatggtgctgtgaaattggatggtgggaattcacaagagggggggagttttttggtg
tcgtctagtgaatcaggatgtgatagtgtgatggatcgcggtggtgataatgcggtgggg
tcggaggtcgggccagatttgagcgtgggcaagagcaatggaatgcataattcggggatt
aaggtggttgattggaatgcgtttaatgctgctgattcaaatggtggtactgggtttgga
tcgtattctgactttttcaccgagtttgaagatcaatctgggaaaggatttcatgattct
aataagactgaggtgaaacctggaaatgaaattgcaaacgatagcttagatgcttcagct
aattatgtgcaatatcaagatggtcaaggttatgatgcatctacaggaaatgggattagt
gagcaacaagatccgaatagcagtcagtattgggagagtctatatcctggttggaagtat
gaccacaacacggggcaatggtatcaagtagatgaccctaatgcaacagccactactcag
ggtggctctgatgccagtacaggtgtcggttggactgcggctgctgatgctaaagcggag
gtctcctatctgcagcaaactcctcagtctgttgcgggaactttagctgaaactggcaca
actgaaagtgtatctagctggaatcaggtttcacaagggaataatgggtatcctgagcat
atggttttcgatcctcagtatccgggttggtattatgacacaattgcccaagaatggcgc
tcgttagagacttacaattcatcaattcaatctgctactcagggacttcaaaatggtaat
gcttctaccagttcttttgcacataatggtaacaatttctatggagagtatggccaagcc
ggaaattatgagccacagggcattagtagtcaagctgcaaatgatagctggggtggttct
tatggtattagtcatcagcagggtttggaaacatccacaactcagtctgctattagaagt
ggggacagtgcaacttcgggtggaaaccagcaatatgatcatccttttggttcaagtatt
tctttcaacagggatcaacaaaatacttcaagctcctttgggtcagttccatcgtacaat
aaagcaaaccccgaccatgggttggctaatggaactcttgaagtgcaaaactttgctccg
agtgggaactatggtcaacattttaattattcgaacacacagtttgatgaacaaaaaaaa
ttctcaaatgattatgctgatagtcagaagcctctcagttactcccggcaatcattccag
ggtgggcatcagcaatcatacgcccctaatgttggaagatcatcagctggacgtcctcct
catgccttagtaacctttggctttggtggaaaactcattgtaatgaaagattctaatctg
ttgagctcaccatatgaaagtcagagttctgtacaaggctctgtttctgtgttaaacttg
atggaagttgttgctggaagcattgattcttccagcattggaaatggcgcttgtgattat
tttcgggctctcagccagcaatctttcccaggtccattggttggtgggagtgttggaagt
aaagagttgcacaaatggatagatgagaggattacgcactgcggatcgcctgacatggat
tataagaaaggcgaaaagttgagactccttctgtccttgcttaaaatagcctgtcaacat
tatggaaaactacgttctccttttggtacggacaacatactaaaagaaaatgataatcct
gggtcagcagttgcaaagctttttgcatctgccaaaatgagtggcaaggagttcactcag
tatggtgtgctgagccactgcctgcaaaatttgccttctgaagcacaaatgcgggcaacg
gcttctgaggtacagaatcttcttgtctctggcaaaaagaaggaggctttgcaatatgca
caagaaggtcagttatggggacctgctcttgttcttgcttcacaactcggtgaacagttc
tatgtggatactgtgaaacaaatgtcacttcgtcaactggttgctgggtctcctctgcgc
acattatgccttctaattgctgggcaaccagctgaagttttctcttctgacagctcaaca
agtggggaccctagtgcttttgatatgcctcagcagcatgtgcagtttggatctaatggc
atgcttgaagattgggaggagaatctggctgtaataaccgcaaacagaactaaagatgat
gagcttgtaattattcatcttggtgattgcttgtggaaggaaagaagtgagattactgct
gcacacatctgctatttaattgctgaagcaaattttgagtcatactcagatagtgcaagg
atgtgtctgataggagcagatcactggaaatttcctcgaacttatgctagtccagatgct
atccagaggacggagttatacgaatattcaaaggtgcttggaaactctcaattcattttg
cttccatttcagccatataagattatatatgcatgtatgctagctgaagtgggaaagttg
tcagactcgttgaagtactgccaagcagtactgaaatccttaaaaactggccgtgcacca
gaagctgaaacatggaaacaattgatatcatctcttgaggagaggattagagcccaccaa
cagggtgggtatgctgcaaatctggctcctgcaaaattagtgggcaaattactcaacttt
tttgatagtactgctcatagagttgttggtggtttaccaccacctgctccatcatcatca
caaggaactgctcagggaaatgaacaaactttccaaactactgcgcacagagtatccaat
agccaatcaacaatggccatgtcatctttagtcccgtctgcttcgatggagtggacagct
gacaataatagaacgacaaaacctaatagaagcgcttcagagccagactttggtagaact
ccccgtcagggaaaatcacccgattcaggggccacttctcgcttttctcgttttggtttt
ggctcacaacttttgcaaaagacggtggggctagtcttgagacctcgccctggcaaacag
gctaaattgggggaaaagaacaagttctattatgatgaaaacctgaaaagatgggtagag
gaaggtgctgaacttccagctgaagaaactgcattaccaccacctccaaccactactgtt
ttccagaatggttcaactgactacaacttgaaatctgcattgaagacagaagtgtcacct
tcaaatgagggttctgatttgaaaacttcgagtcctgaactgactccagggatcccacca
ataccacctagcacaaatcaattctctgcccgtggtcgccttggtgttcgatcaaggtat
gttgacaccttcaaccaaggtggtggaagctctgcaaacttgtttcagacaccacctgtt
ccatctgtcaaacctgctgtcactgccaatgcaaagttttttattcctgctccagcacca
tcatcaagtgagcagacaatggaagctatagcagaaaataatcaagaagatagttcagct
cttgaaaatccgtcaacatcttctaggaatgattgggcatacctatcccccaaaacacca
tcaccaatggccaggcaaaggtttccaagtatgggtaacatcccaagcccgggagcaatg
attaatggcagtaactctcatcatactcatacgtcccctcattcacggcgaacagcttca
tggagcggtgggagttatggtgattcattctatcccaccacaaaaatgaatgaagctaag
cctctaggggaagctttgggaatgccaccatcaacatttatgccagatgatgcttcttta
atgcacactcctgtgaagagtgggagttttggagatcttcatgaggttgaactttgagca
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