Lotus japonicus: Lj4g3v2991200.1
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Entry
Lj4g3v2991200.1 CDS
T04348
Symbol
Lj4g3v2991200.1
Name
(Kazusa) -
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Lj4g3v2991200.1 (Lj4g3v2991200.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
Lj4g3v2991200.1 (Lj4g3v2991200.1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj4g3v2991200.1 (Lj4g3v2991200.1)
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj4g3v2991200.1 (Lj4g3v2991200.1)
03041 Spliceosome [BR:
lja03041
]
Lj4g3v2991200.1 (Lj4g3v2991200.1)
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
Lj4g3v2991200.1 (Lj4g3v2991200.1)
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
Lj4g3v2991200.1 (Lj4g3v2991200.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Lj4g3v2991200.1 (Lj4g3v2991200.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Lj4g3v2991200.1 (Lj4g3v2991200.1)
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Lj4g3v2991200.1 (Lj4g3v2991200.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
LinkDB
All DBs
AA seq
321 aa
AA seq
DB search
MDENVLDEIIRRLVAAKNGRTTKQVNLTEAEIRLLCVSAKEIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLSYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRYNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELKNL
DQIRNIARPIDVPDHGLLCDLLWADPDKDIDGWGENDRGVSFTFGADKVVEFLEHHDLDL
ICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKG
KMGFGNNSSRPGTPPHKGGKA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacgtgcttgatgaaatcatccggaggctcgtggcggccaagaacgggagg
accaccaagcaggtcaacctcacggaggcggaaatccgtctgctctgtgtttccgctaag
gagatcttcctcagccagcccaatctcctcgagcttgaagctcctatcaagatttgcggt
gatgtccatggccagttctcagatcttttaaggttgtttgaatatgggggatacccacct
gaagcaaattatttatttcttggagattatgttgatcgtggtaagcagagcatagagaca
atatgcttactcctatcatacaagatcaaatataaggagaatttctttcttctcaggggc
aaccatgaatgtgcttccatcaatcgtatctacggtttctatgatgagtgcaagaggagg
tataatgttcgcctctggaagacttttactgattgctttaattgtctacctgttgctgct
ctaatagatgagaagatcctttgcatgcatggtggactatcacctgaactaaaaaactta
gatcagataaggaatattgctcgtcctattgatgtgccagatcatggccttctctgtgac
cttttatgggctgatcctgataaagatattgacggatggggagaaaatgatcgaggtgtt
tcttttacatttggggctgataaggttgttgaatttcttgaacatcatgatctcgatctg
atttgtagagctcaccaggttgtagaagatgggtatgagttttttgctaaacgtcagctg
gtgaccgtattctccgcacccaattactgtggtgaatttgataatgctggtgctatgatg
agtgttgatgacaccttgacatgctctttccagatactcaagtcttctgaaaagaaaggg
aaaatgggatttggtaacaactcatcgagaccaggaactccacctcataagggggggaag
gcttaa
DBGET
integrated database retrieval system
