Lactobacillus johnsonii FI9785: FI9785_1397
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Entry
FI9785_1397 CDS
T01120
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
Organism
ljf
Lactobacillus johnsonii FI9785
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
N6_N4_Mtase
Met_10
Methyltransf_15
PrmA
Methyltransf_25
PCMT
MTS
RrnaAD
DOT1
Motif
Other DBs
NCBI-ProteinID:
CAX67257
UniProt:
D0R594
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Position
1321341..1322720
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AA seq
459 aa
AA seq
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MTKFTKNKQEKNIIITIKRLGINGEGIGYYKKKIIFIPGALPNEIVVAKIVDRHPHYLEG
ELVRIKEKSPDRVTFPKGVDPAVGGLELAHLSYPKQLEFKQHLILESLRKYHPRDYIKYK
VKKTIPAPNAWNYRNKAQYQIEFNKGKSKLGLYAPNSRRLIDLPDMPTQTKGTQKVEREI
KKLIDKLHIRIADFRRHTDGIKTIAVRQSNATGEIQVTLITIGKKIKDLKLLASHIMKLP
NVVSVFQNETQWQNPQVWGNKTIKLFGKSHITEEILGKKFKLSPRAFFQLNPEQTTTLYS
EALKYLDLTPDQTLIDAYAGVGTLGILASDQVRQVIGIESIPEAVIDAQENCRLNHVRNA
EYIQGNVEKLLPELKNQGVPINALIVDPPRTGLSKKLIKTLLEVKPETFVYVSCNPATLA
KDLVLLSEAYDVRVIQPVDMMPQTPRWEGVTKLVLRKNK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatttactaaaaacaaacaagaaaaaaatattatcatcactattaaacgcttg
ggtattaatggcgaaggtattggatactataaaaagaaaattatttttattcctggtgcg
cttccaaatgagatagttgttgctaagatagttgatcgtcatccacactatctggaaggt
gaattagtaagaattaaagaaaaatctcctgacagagttacctttcctaaaggagttgat
cctgcagttggtgggctagaactcgcacacctttcttatccaaaacaacttgaatttaaa
cagcacctaattctagaatcgcttagaaaatatcatccaagagactatattaaatataaa
gtcaaaaagacaattcctgcaccaaacgcttggaattatcgaaataaagctcaatatcaa
attgaatttaataaggggaagagtaaacttggtctctatgctcctaattcccgtcgtctt
attgacctgcctgatatgcctactcaaacaaaagggactcaaaaagtagaacgtgaaatt
aagaaactaatcgataaacttcacatccgaattgccgactttagacgtcataccgatgga
attaaaaccattgccgttcgtcaaagcaatgctactggtgaaattcaggtaactttaatt
acaattggtaaaaaaattaaagatctcaagttactcgctagtcatattatgaaacttccg
aatgtagtttccgttttccaaaatgaaactcaatggcaaaatcctcaagtttggggcaat
aaaactattaaattattcggaaagtcacatattacagaagaaatactaggtaaaaaattt
aagctttcaccacgcgcatttttccagcttaaccctgaacaaactactactctttactca
gaagcccttaaatatcttgacttaactcctgatcaaactttgatcgatgcttatgcgggc
gttggtactttaggaatcttagctagcgatcaagtaagacaggttattggaattgaatcc
attcctgaagccgtaatcgatgctcaagaaaactgccgcttaaatcatgtaagaaatgcg
gaatatattcaaggaaatgtagaaaaattacttccagaattaaaaaatcaaggtgttcca
attaatgcattaattgtcgacccaccacgtacgggattaagcaaaaagttaattaaaact
ctacttgaagtaaaacctgaaacctttgtttatgtttcttgtaacccagctactcttgca
aaagatttagttcttctaagtgaagcttatgatgttagggtaattcaaccggttgatatg
atgccacaaacaccacgttgggaaggcgttaccaaactagttttaagaaaaaataagtaa
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