Lactobacillus johnsonii DPC 6026: LJP_0454
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Entry
LJP_0454 CDS
T01960
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJP_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0454
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJP_0454
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJP_0454
RecFOR pathway proteins
LJP_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_16
AAA_14
RNA_helicase
NB-ARC
AAA_24
AAA_3
AAA_18
TsaE
DUF815
AAA_25
Bac_DnaA
HTH_AsnC-type
AAA_17
Rad17
IstB_IS21
NTPase_1
Sigma54_activ_2
Torsin
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEB92788
LinkDB
All DBs
Position
500389..501408
Genome browser
AA seq
339 aa
AA seq
DB search
MKDVNEEERIIGAESSEEDETIELSLRPQLLAQYIGQDKVKSEMKIYIKAAKQRDEALDH
VLLYGPPGLGKTTLAFVIANEMGVHLKSTSGPAIEKAGDLVALLSELNPGDVLFIDEIHR
LAKPVEEVLYSAMEDFYIDIVVGEGQTTHAVHVPLPPFTLIGATTRAGQLSAPLRDRFGI
IEHMQYYSVEDLEKIIQRSSVVFNTKIDPEAAIELARRSRGTPRVANRLLKRVRDFAEVK
GEEAISLVTTKHSLHLLEVDDEGLDQTDRKLLRMMIENYGGGPVGIKTIAANVGEDTDTI
EEVYEPYLLQKGFITRTPRGRSVTQKAYLQLGYPPKDEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatgtgaacgaggaagaacgaattataggagcagaaagcagtgaagaagatgaa
acaatcgaattatcgctgcgtccgcaattacttgctcaatatattggacaagataaagtt
aagagcgagatgaaaatctacattaaagcagcaaaacaacgtgatgaagctttagatcat
gttcttttgtatggacctcctggattaggtaagactactttggcttttgtaattgctaat
gaaatgggggttcatttaaagagtacatccggaccagcaattgaaaaggctggagactta
gtagcgctgctttcagaattgaatccgggggatgttctgtttatcgatgagattcaccgt
ttagcaaaacctgtggaagaagttctctattcagcaatggaagatttttatatcgacatt
gttgttggagaaggtcaaacaacacatgcagtccatgtaccactacctccttttacctta
attggggcaactacgagagcaggtcaattgtctgcaccgctaagagatcgttttggaatt
attgaacacatgcagtactattctgttgaagatttagaaaaaataattcaaagatctagt
gtagtctttaatacaaagattgatcctgaagcagcaattgaactagcgcgtcgctctcgt
ggaacgcctagggttgctaaccgcttgcttaaacgtgttcgtgattttgctgaagtaaag
ggtgaagaagctatttcgttagtaacaactaagcactcacttcatttattagaagttgac
gatgaaggactagatcagactgaccggaaacttttaagaatgatgattgaaaattatggc
ggaggtccagttggaattaagacaattgcagctaatgtaggggaagatacagatacaatt
gaagaagtatatgaaccatatttactacaaaaagggtttattactcgaactcctcgaggc
agaagcgttacacaaaaagcttatctgcaattaggttatccaccaaaagatgaaaagtaa
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