Lactobacillus johnsonii N6.2: T285_05795
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Entry
T285_05795 CDS
T02941
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T285_05795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_05795
Enzymes [BR:
ljn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
T285_05795
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T285_05795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
UvrD_C
UvrD-helicase
AAA_22
RsgA_GTPase
T2SSE
DEAD
NTPase_1
IMS_HHH
AAA_29
AAA_12
AAA_28
AAA_5
MCM4_WHD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHA97529
UniProt:
A0A7D9N768
LinkDB
All DBs
Position
complement(1200597..1202972)
Genome browser
AA seq
791 aa
AA seq
DB search
MAETSFTGRINGIVFENNQDLFKIIDVDLISKLPDYDRDNIRVTGNFGDIQIGSTYKFTG
NIVVHEKFGKQFRIRSYEPVLPHEEGSLAKYLSSDKFPGIGKRAAEKIIDSLGTNALDLI
KSNPTEIDNLDLTQKQKDSLLSGINQMDSFSEIVIKLARYGINKKVAGNIYKVYHGDSLK
KLEEDPYQALGEVRGFGFKTADNMGHALGIELNDPRRVRGALLSILQTALNTLGDTYVAL
DELLTQAYDLVQSTSYDELANSVNELQRQGKVVVSGDKAALQTIFQTELDIATELKHVVN
NQVEKEEFDDSDIEKAIKHVEETLEIEYDDTQKNAIKNALNNPISILTGGPGTGKTTIIN
GILMCLKELAEIPSAALYSDDPPFLLAAPTGRAAKRMSEVTDISAKTIHRLLGLGIGENE
ATDVNELNGEILIIDEMSMVDMFLFKQLLSGINSTKRIVFVGDKDQLPSVGAGNVFGDLI
SSGAFPTTRLQVIHRQGEDSSIIKLAHAINDEEAEETIFNKTKNYSFIPCQPSLVGDAID
QIVNLAIKRGFKKDDIQVLGAMYNGQGGITHLNDILQDVMNPLSVKTKVIEAHNESFRIG
DRILQLQNNPEKDIYNGQIGKIIGLNPDDKAKILIADFDGREIEFGIKDLNDITRAYAIT
IHKSQGSEFPLVILNLTMQNYMMLRRNLLYTAITRAEKNLVMVGEKKAYIMALRTPGNDR
KTELAAKIRHELGLKEIEDTSNVNAEQEETKAEVKEETAEPENYILTPELIYSGQIDPMI
GMEDIKLEDKK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactagttttactggacgaataaatggaattgtttttgaaaacaatcaagat
cttttcaagattattgatgtagatttaatcagtaaattacctgattacgatcgtgataat
atccgagtaactggaaattttggggatatccaaattggatcaacttataaatttaccggt
aatattgtcgtgcacgaaaaatttggtaaacaatttcgtataaggtcttatgaaccagtt
ttgcctcatgaagagggtagtttagctaaataccttagttctgataagtttcctgggatt
ggtaagagggctgctgaaaagatcattgatagtttaggaacaaatgcgttagatttgatt
aagtcaaatccaactgaaattgacaatcttgatttgacccaaaagcaaaaggatagctta
ttatctggaattaatcagatggattctttttcagagattgtgattaagctggctagatat
gggattaataaaaaagtagccggtaatatttataaagtatatcatggtgattccttgaag
aaattagaggaagacccttatcaagctcttggtgaagttcgcggctttggttttaaaact
gcggataatatgggacacgcgctcggaatagaactaaatgatcctaggagagttagggga
gcacttctaagtattttacaaactgctcttaataccttgggagatacttatgttgcactt
gatgaattattaacacaggcttatgatttagttcaatctacctcttatgatgagcttgct
aatagtgttaatgaacttcaaaggcaaggaaaagttgttgtttcaggtgataaggcagct
ttgcagacaatttttcaaactgaacttgatatagccactgaattaaaacatgtagttaat
aatcaagtcgaaaaagaagaatttgatgatagcgatattgaaaaagcaataaagcatgtc
gaagaaacacttgaaattgaatatgatgatactcaaaaaaatgcaattaaaaatgcgtta
aataatccaatttcaattcttactggtggtcctggtactggtaaaacgacaattattaat
ggaattttaatgtgtttaaaggaacttgcggaaattccaagtgcagctttgtatagcgat
gatccaccatttttacttgctgcaccaacaggtcgagctgccaagcgaatgagtgaggtt
acagatatttcagcgaaaaccattcaccgtttattagggttaggcatcggtgaaaatgaa
gcgactgatgtaaacgaattaaacggtgagatcttaattattgatgaaatgtcgatggtt
gatatgtttctttttaaacagcttttatccggtattaattcaacaaagaggatagttttt
gttggggacaaagatcagcttccttcagttggagcaggtaacgttttcggtgatttaatc
agctccggagcatttccaactacacggttgcaagtgattcatagacagggggaagattca
tcaattattaagttggcccatgcaattaatgatgaagaagccgaggagactatttttaat
aaaactaaaaactactcttttattccatgtcaaccaagcctggtgggggatgcaattgat
caaatcgtaaatttagccattaaacgtggcttcaaaaaggatgatattcaagttctggga
gccatgtacaacggtcaaggtggaattactcacttgaatgatattttgcaggatgtgatg
aatccactatcagtaaaaactaaagtaattgaagctcacaatgaaagttttagaatcggg
gaccgaattctacaattacaaaataatccagaaaaagatatttataatggtcaaattggt
aaaattattggccttaatcctgatgataaagccaaaatattaattgcagattttgacggt
cgtgaaatagaatttggtattaaagacttaaatgatattacccgtgcatatgccattact
atccataagtcccaaggatcagaatttccgctagtgattttgaatcttactatgcaaaat
tatatgatgctgagacggaatttactatatactgctattactcgtgccgagaagaattta
gttatggtaggagaaaaaaaggcgtatatcatggcgttgcgtacgccaggtaatgaccgt
aagactgagttagcagctaaaattaggcatgaactaggtcttaaagaaattgaagatact
tcaaatgtaaatgcggaacaagaagaaactaaagctgaggttaaagaagaaacagctgag
ccagaaaattatattctgactccggagctaatttattctgggcagattgaccccatgatt
ggtatggaagatattaaattagaagataaaaaatag
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