Lutra lutra (Eurasian river otter): 125110276
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Entry
125110276 CDS
T08100
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04140
Autophagy - animal
llv04148
Efferocytosis
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125110276
04148 Efferocytosis
125110276
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125110276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125110276
Membrane trafficking [BR:
llv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125110276
Hops complex
125110276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
DLP_helical
zf-RING_11
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
DUF5847
Motif
Other DBs
NCBI-GeneID:
125110276
NCBI-ProteinID:
XP_047603335
LinkDB
All DBs
Position
10:15079748..15090110
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AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPAAAPASGPAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYQPSLEGRGDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAITLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVVAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKWTLLTDPPTARLTASLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag
ccgctagggaatgatggggcagctcctgcggctgcacctgcctcaggacccgctgcttcc
aagttcctctgcctccctcccggcatcactgtctgcgactccggccgagggagcctagtc
tttggagatatggaaggccaaatctggttcttgcctcgctccctacagctgacaggcttc
caagcctacaaactgcgggtgacacacctgtaccaactgaagcagcacaatattttggca
tctgttggtgaagatgaagaaggcatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcacccgaatcttccctgccatcccaggaacagagccg
acagttgtgtcttgtttgactgtccatgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacattgaacaaaggagacattacccgggaccggcatagcaagacccag
attctgcacaagggcaactatcctgtaactgggctggcctttcgccaagcaggaaaaacc
actcatttgtttgttgtgacaactgagaatgttcagtcctatatagtttctggaaaggat
taccctcgtgtggagttggacacccatggttgtggcctgcgctgctcagccctaagtgac
ccttcacaggacctgcaattcatagtggctggagatgaatgtgtctatttgtaccagcct
gatgaacgtgggccctgctttgcctttgagggccataaactcatcgctcactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcggagtttaccagt
agggactcacagagctccgacaagcagattctcaacatctatgacctgtgcaacaagttc
atagcctatagcgctgtctttgaggatgtagtggatgtgcttgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctatttaagaagaacctatttgagatggccatcaacctggccaagagccag
cacctggacagtgatggcttggcccagatcttcatgcagtatggggaccatctctacagc
aagggcaaccacgatggggctgttcagcagtatatccgaaccattggaaagttggagccg
tcctatgtgatccgcaagtttctggatgcccagcgcatccacaatctgaccgcctacctg
cagaccctgcaccggcagtccctggccaatgccgaccacaccaccctgctgctcaactgc
tataccaagctcaaggacagctcgaagctagaggagttcatcaagacaaagagtgagagt
gaagtccacttcgatgtggagacagccatcaaggtcctccggcaggcgggctactactcc
cacgccctctacttagctgagaaccatgcccatcacgagtggtacttaaagatacagtta
gaagatatcaagaattatcaggaagccctccggtatatcggcaagctgccttttgagcag
gctgagagcaacatgaaacgctatggcaagatcctcatgcaccatataccagagcagacg
acccagttgctgaaggggctctgtacagactatcagcctagcctcgaaggtcgaggcgat
cgggaggccccaggctgcagggccaactctgaggagttcatccccatctttgccaataac
cctcgagagctgaaagctttcctggaacacatgagtgaggtccagcccgactcaccgcag
ggcatctatgacacgcttctggagctgcgactgcagaactgggcccacgagaaggatccc
caggtcaaagagaagcttcatgcagaggccatcaccctgctgaagagcggccgcttttgt
gacgtctttgacaaggccctggtcctttgccagatgcacgacttccaggatggggtcctt
tacctctacgagcaggggaagctgttccagcagattatgcactaccacatgcagcacgag
cagtaccggcaggtagtggccgtgtgcgagcgccatggggagcaggagccctccctgtgg
gagcaggcactcagctacttcgcccggaaggaggaggactgcaaggagtacgtggccgct
gtgctcaagcacattgagaacaagaacctcatgccgcccctactagtggtgcagacgctg
gcccacaactccacagccaccctgtctgtcatccgggattacctggtccaaaaactgcag
aaacagagccagcagatcgcacaggatgaactccgggtgcggcggtaccgagaggagacc
acccgcatccgccaggagatccaggagctcaaggcgagtccgaagatcttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctccgtccactttctctgcggtcac
tccttccaccaacactgctttgagagttactcggaaagtgatgccgactgtcccacctgc
ctccctgaaaaccggaaggtcatggatatgatccgcgcccaggaacagaaacgcgatctg
cacgatcagttccagcaccagctcaagtgctccaacgatagcttctctgtgatcgcggac
tactttggccgaggtgttttcaacaaatggactctgctgaccgaccctcccacggcccgg
ctgactgcaagcctggaggctggactgcagcgggacctgctcatgcactccaggaggggc
acttaa
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