Lactococcus cremoris subsp. cremoris KW2: kw2_1620
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Entry
kw2_1620 CDS
T02848
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
llw
Lactococcus cremoris subsp. cremoris KW2
Pathway
llw03030
DNA replication
llw03430
Mismatch repair
llw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
kw2_1620 (holA)
03430 Mismatch repair
kw2_1620 (holA)
03440 Homologous recombination
kw2_1620 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llw03032
]
kw2_1620 (holA)
03400 DNA repair and recombination proteins [BR:
llw03400
]
kw2_1620 (holA)
Enzymes [BR:
llw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
kw2_1620 (holA)
DNA replication proteins [BR:
llw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
kw2_1620 (holA)
DNA repair and recombination proteins [BR:
llw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
kw2_1620 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF5405
DUF6096
Motif
Other DBs
NCBI-ProteinID:
AGV73576
LinkDB
All DBs
Position
complement(1709947..1710951)
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AA seq
334 aa
AA seq
DB search
MTVFDEFNEVKRKGLPQILVIFGESKEMVQELKSQLLTFVNFEPTDLSQSYYDLTPNNSD
LALEDLESLPFFSDSHLVILENLVNLTTAKKTILDEKQLKRFENFLDDPSETTQLVLVLY
GKLDSRLKVVKKLKAKATLLEAQELKTQELIQYFSHETSLPRPVLSLIAAKSNDSFSVVK
QNIDLVQTYALGREVTVDDVEKVVPKSLQDNIFALTDLIFKGKIDEARDLVHDLTLQGED
LIKILAILTNSYRLYLQVKLFQEKGWQENQQVSYLKMHPYPVKLANQLVRRLQVSSLKKG
LADLIQLDFAIKTSAADKAYLFDILLIKLTLKKN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatttgatgaatttaacgaagtcaaaagaaaagggctccctcaaattttagta
atttttggtgagtcaaaagaaatggttcaagaattaaaaagccagttattgacttttgta
aattttgaaccgacagatttaagtcaatcctactatgacttaacgcccaataatagcgat
ttagccttggaagacttggaatcccttcccttcttttctgattctcatctagttattttg
gaaaacttggtcaatttaacaacggctaaaaaaactattttagatgaaaaacagcttaag
cgttttgaaaattttttagatgacccttcggaaaccacccagcttgtgttggtactctat
gggaaattggacagtcgcctaaaagttgtcaaaaaattaaaagccaaagcaactttactt
gaagcacaggaattaaaaacacaagaactcattcaatattttagtcatgaaacttcactg
ccacgacctgtattaagtctaattgcagccaaatctaatgacagtttttcagtagtgaag
caaaatattgatttagttcaaacttatgctttagggcgtgaagtcacggtagatgatgta
gaaaaagtagttccaaaatcactacaagataatatctttgccttgactgacttaattttt
aaaggaaaaattgatgaagcgcgtgatttagttcatgatttaactttacaaggagaagat
ttaattaaaattttagcgattttgactaattcttatcgattgtatttgcaagtcaaactt
tttcaagaaaagggttggcaagaaaatcaacaggtttcatatctgaagatgcacccttat
ccagtgaaattggctaatcaattggtccgaagattgcaagtgagttctttaaaaaaagga
cttgctgatttaattcaactcgattttgcgataaaaacgagtgcagctgataaagcttat
ctttttgatatcctattaatcaagttgaccttgaaaaaaaactga
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