Liquorilactobacillus mali: LM596_07935
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Entry
LM596_07935 CDS
T06815
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03410
Base excision repair
lmal03430
Mismatch repair
lmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LM596_07935 (recJ)
03430 Mismatch repair
LM596_07935 (recJ)
03440 Homologous recombination
LM596_07935 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_07935 (recJ)
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LM596_07935 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LM596_07935 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LM596_07935 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
DUF3929
DUF5788
Motif
Other DBs
NCBI-ProteinID:
QFQ75054
LinkDB
All DBs
Position
complement(1635604..1637934)
Genome browser
AA seq
776 aa
AA seq
DB search
MFDKHYEWKFESMSLGEKELKLQKQMGISKLLAQLLLKRGISTPEAAAEFLNPNENSIYD
PYLLHDMDKAVERIQAAVMDNQKITIYGDYDADGLTSTAVLYEALEQIGANVGYYIPDRF
TDGYGPNMEVYKKLVDDGTELIVTVDNGVGGYDEVAYAQSHGVDVVITDHHELPDKLPEA
VAIVHPRHPDKKYPWPNLAGVGVAFKVASALLEDIPQELLDLVAIGTVADLMPLLDENRA
LVKFGIMALRNTQRPGLLALLANAKINIDDINEETIGFALAPRLNSLGRIQNGSTGVELL
TTLDEDKAKQIANKVESLNTERKELVATISKQAFKKLAEDETEHLVNVVAGKDWHEGVLG
IVASHLVEETGKPSLVLSITDDGNIAKGSGRSVEAFQLFDAINGHRDLLTSFGGHHMACG
LSLEESKIGELQAVLDNEAIKQQLDLTKKAQLEIEQTIEADEVSLDLIEELKRLAPFGVD
NPKPIFSFTNYNVQSSLLMGQEKNHFKMSIRGKRAPIDVIAFSIGTHGQQLVDNAENIEF
VGELATNVWKGQTKIQIMIKDFCLNAVEIPRIRINDLRSSKLTASLLRTDGEFFFFNSTV
YSKLAGYFKRDAKIIVGLEKLPERGKVDNLVVVDCPPNLESFGTLLNRIEFEEITTILYP
YKPVFLTGMPTKEEFGKVYRFAISHKNVDLKKDLNKLADYLKIKKDLLIFTLQVFFEVGF
VKIDNGLMAGSSSRKRINLKDAPSYRARQRLLEAENVLLTSKTAEFEKTISQFITV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgacaagcactacgaatggaaattcgagtctatgtcgttgggagaaaaggaactc
aagctgcaaaaacaaatgggtatttcaaaactgttagcacagctattgctcaaaagggga
atttcaactcccgaggctgctgctgaatttttaaatcctaacgaaaatagtatttatgat
ccatacctcttgcatgatatggataaggctgtagagcgaattcaagctgcagtaatggac
aatcaaaagattacgatttatggcgactatgatgcagatggattaacaagtacagctgta
ctgtatgaggctcttgagcaaatcggtgccaatgtaggttattatatacctgatcgtttt
actgatggatatggtccaaatatggaagtatataagaaactggtcgatgatggaactgaa
ctgattgttacggtagataatggggtcggtggttatgatgaggttgcatatgctcagagc
cacggtgttgatgttgtaataaccgaccatcatgaattgcctgataaattacctgaggct
gtggctattgttcacccaagacatccggataaaaagtacccatggccaaatttggcaggt
gttggtgttgctttcaaagttgcttcggcattactggaagatattccacaagaactactt
gatttagtcgcaatcggaactgttgctgatttgatgcccttgcttgatgagaatcgtgca
ctagttaaatttggcattatggcacttagaaacacccagcgcccgggactgttagcattg
ttggccaatgctaaaatcaacattgatgatatcaacgaggaaacaatcggttttgcgctt
gctccgcgactgaattcgttgggaagaattcaaaacggaagtactggtgtggagctactg
acgacacttgatgaagacaaggcaaagcagattgcaaacaaggttgaatccttgaatacc
gagcgtaaagagctagtggcaacgatctcaaagcaggcatttaaaaaactggctgaagat
gaaactgaacatttagtaaacgttgttgctggtaaggattggcacgagggtgtgctggga
attgttgctagccacttggttgaggaaacaggtaaaccttcactggtattgagtattact
gatgatggaaatatcgcaaagggttcaggaagatcagttgaagcctttcagcttttcgat
gcaattaatggtcatcgtgaccttttaaccagttttggtggacatcacatggcatgtggg
ctgtctttggaagagtcaaagattggtgaactgcaagcggtattagataatgaagcaata
aaacagcagttggatttgaccaaaaaagcccaattagaaattgaacagactattgaggca
gatgaagtcagccttgatttgatcgaagaattaaagcggctagcaccgtttggggtagac
aaccctaagccaattttttcttttacaaactataatgtacaaagttcgctcttaatggga
caagagaagaatcacttcaaaatgtctataaggggtaaaagagcaccaattgacgtaatt
gcgttttcaattggtacgcatggacagcagcttgtcgataatgctgagaatattgaattt
gttggtgagttggctactaatgtgtggaagggtcaaactaagatccaaataatgattaag
gacttttgtctaaatgctgtggagatacccagaatcagaattaatgatttgaggagcagt
aaattgacagcaagtttgctgcggacagatggcgagttctttttctttaactcaactgtc
tacagtaagctagccggttattttaagcgcgatgcgaaaattattgttggtctagagaaa
ttgcctgagagagggaaagtagacaatctggtcgtcgtagattgccctcctaatttggaa
agctttggtactttgttaaataggattgagtttgaagaaattacgacaattctctaccca
tacaagccggtatttcttactggaatgccgactaaggaagaatttggtaaggtttatcgc
tttgcaatttcacataagaatgtggatttaaaaaaagatttgaataaattagcagattac
ttgaaaataaaaaaagatttgttgatttttaccttacaggtgttttttgaggtcggattt
gttaaaatagataatggtttaatggcgggatcatcttcaagaaagaggattaatttgaaa
gatgctcccagttatcgtgcgagacaacggttgcttgaagcagaaaatgtcttattaacg
agtaaaactgcagagtttgagaaaactatttcccaattcataacagtttaa
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integrated database retrieval system
