Leisingera methylohalidivorans: METH_12965
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Entry
METH_12965 CDS
T02961
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmd03009
]
METH_12965
Enzymes [BR:
lmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
METH_12965
Ribosome biogenesis [BR:
lmd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
METH_12965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHD01470
UniProt:
V9VVS0
LinkDB
All DBs
Position
complement(2497133..2498158)
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AA seq
341 aa
AA seq
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MGSRRIEFVIAENPPKRLDKAVSRDVPEEAALSRTRLARLIEAGALTVDGAVVQDAKAKA
EAGAQIAIIVEEAEDSHIGPEDIPLDTVFEDGDLIVINKPAGMVVHPAPGSPSGTLVNAL
LHHFGGNLSGVGGVKRPGIVHRIDKETSGLLVVAKSDAAHQGLAVQFEKHTVERYYQAVC
YGVPDGNDPRLRGVKGASFEPGNILKLTTQLARHKTDRQRQAVLFQGGRHAVTRARICES
FGNPACAALIECWLETGRTHQIRVHMAHAGHGLVGDPTYGGRRKLAAKALNEAAQAAVQS
FPRQALHAAVLGFDHPVTGEPLRFEAPLPQDMAGLLAALRQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgccggattgagtttgtcatcgcggaaaacccgcctaagcggcttgataaa
gcggtttcgcgcgatgtgccagaggaggcggcgctgtcgcgcacccgtctggcccggctg
atcgaagcgggggcgcttacggtggatggcgccgtggtgcaggatgccaaggcaaaggcc
gaggccggcgcgcaaatcgcgatcatcgtggaggaggctgaggacagccacatcggcccc
gaagacatcccgctggataccgtgtttgaagacggcgacctgatcgtcataaataagccc
gcaggcatggtcgtgcatccggcgccgggctccccctccggcactctggtcaatgcgctg
ctgcatcatttcggcggcaacctgtcaggtgtcggcggcgtcaagcgccctggaatcgtg
caccggatcgacaaggaaaccagcggccttttggtggtggcgaaatccgatgccgcccat
cagggactggccgtgcaattcgaaaaacacacggtggagcgttattatcaggcggtctgc
tatggggtgcccgatggcaacgacccgcgcttgcgcggcgtcaagggcgccagtttcgaa
cccggcaatatcctcaagctcaccacccagctggcccgccacaagaccgaccggcagcgt
caggcggtgctgttccagggcggccgccacgcggtgacccgagcccgcatctgcgagagt
ttcggcaacccggcctgcgcggcgctgatcgaatgctggctggaaaccggccgcacccac
cagatccgggtgcatatggcccatgccggccacgggctggtgggggatcccacatatggc
gggcgccgcaagctggcggccaaagccctgaacgaggccgcacaggcggctgttcagtcc
ttcccgcgccaggcgcttcacgctgccgttctggggttcgatcacccggtgacgggcgaa
ccgctcaggtttgaggcgccgctgccgcaggacatggcgggtttgctggcggcgctgcgc
cagtaa
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