Listeria monocytogenes HCC23 (serotype 4a): LMHCC_2415
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Entry
LMHCC_2415 CDS
T00801
Name
(GenBank) transcriptional regulator involved in nitrogen regulation
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmh03016
]
LMHCC_2415
Transfer RNA biogenesis [BR:
lmh03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
LMHCC_2415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Oxidored_FMN
NanE
FMN_dh
MR_MLE_C
SOR_SNZ
DHO_dh
HEPN_SAV_6107
PEP_mutase
NMO
G3P_antiterm
ThiG
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
ACK40750
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All DBs
Position
complement(2399527..2400522)
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AA seq
331 aa
AA seq
DB search
MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMISDKGIAYRNAKTLDMLY
IDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGCPVNKIIKCEAGAKWLLDP
NKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAAERAGAAAVAMHGRTRVQMYE
GSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTV
KFLETGELLPEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKV
AANQATKQAEMEAILNEFVLQYEEKALAKQD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaataggtaacgtagaaattaaaaaccaagtagttgtggcgccgatggccggt
atatccaattccgcattccgtctaactgtcaaagaattcggagcaggcctcgtttgctgt
gaaatgattagtgacaaaggaatcgcataccgtaatgctaaaacgcttgatatgctatat
attgatgaaaaagaaaaaccactgagcttacaaatttttggtggtgagaaagaaacgctt
gtagaagctgcgaaattcgtagctgaaaatacaacggcagatattattgatattaatatg
gggtgtccggtaaataaaatcatcaaatgtgaagctggtgcgaaatggctacttgaccca
aataaagtgtatgatatggtagcagctgttgtcgatgctgtagataaaccagtaacagtg
aaaatgcgtatcggttgggacgaagagcatgtcttcgctattgaaaatgcgcttgctgct
gaacgcgccggagctgctgctgttgcaatgcacggtcggactcgtgtgcaaatgtacgaa
ggtagcgcgaactgggatgtacttagagacgtaaaacgcgaacttaaaatcccgttcatg
gcgaatggtgacgtcagaacacctgaagacgcaaaaagaattttagaacatactggcgct
gatggcgtaatgattggccgcgctgctctaggaaatccgtggatgatttaccgcactgtc
aaatttttagaaacaggcgaacttcttccagaaccagaaccacgcgaaaaaatgcaaact
gccatgcttcatctaaatcgcttagtcgagttaaaaggtgaaaacatcgcagtacgtgaa
ttcagacaacatgcagcatactacctaaaaggtgctcgaggaagtacgcgcgccaaagta
gctgctaaccaagcaacaaaacaagcagaaatggaagcaattttaaatgaatttgttctt
caatatgaagaaaaagcattagcaaaacaagactaa
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