Listeria monocytogenes serotype 4b LL195: BN389_13000
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Entry
BN389_13000 CDS
T02416
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmog03032
]
BN389_13000 (topA)
03400 DNA repair and recombination proteins [BR:
lmog03400
]
BN389_13000 (topA)
Enzymes [BR:
lmog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN389_13000 (topA)
DNA replication proteins [BR:
lmog03032
]
Prokaryotic type
DNA Topoisomerases
BN389_13000 (topA)
DNA repair and recombination proteins [BR:
lmog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN389_13000 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
JHBP
DUF2996
Toprim_2
Toprim_3
zinc_ribbon_4
Lar_restr_allev
HypA
Motif
Other DBs
NCBI-ProteinID:
CCO63874
UniProt:
A0A0E1R5S2
LinkDB
All DBs
Position
1280140..1282218
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEASNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EFLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKRFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCEKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaagtat
ttaggtaagaaatttaaagtgaaagcctcaatgggacatgttcgtgacttacctaagagt
caaatgggtgtagacacagagcatgactacgaacctcgttatattacgattcgcggaaaa
ggccctgttttaaaagaattaaaacaagcagccaaaaaagcgaaaaaagtctatctcgca
gccgatccagaccgcgaaggagaagcaattgcatggcacttagccaatagcctagagtta
gatcaatcagacaaactacgtgtagtatttaacgaaataacgaaggaagcagtaaaagaa
tctttcaaaacaccacgtaaaattgacatggatttagtcaatgcgcaacaagcacgcaga
attttggaccgtttagttggatataatatcagtcctattctatggaaaaaagtgaagaaa
ggtttgagtgcggggcgtgttcagtctatcgcacttcgaatcattattgatagagaaaaa
gaaatcaataatttcaaacctgaagaatactggacaattgacggtaacttccttaaaggg
aagaaaaaattccaagccaatttttatggtgtaaatggtaaaaagaaaaagctttccact
gcagatgatgtaaaagaagtaatgtctgcaataaaaggaaaatcatttgacgtaacagat
gtaacgaaaaaagaaagacttagaaatccagctgcaccattcactacttcaagtttgcaa
caagaagcagctcgaaaactaaattatcgtacaagaaaaacaatgatgcttgcccaacaa
ttgtatgaaggaattacacttggtaaacaagggacagtcggcttaattacgtatatgcgt
acagactccactcgtattgccgattccgctatactagaagcaagcaattacattaaagaa
acctatggacccgaattttctcgtaatcataaacgttcagataaaaatgctaaaggtgct
caagatgcccatgaagcaatcagacctacaagtgcaatgagaagtcctcaagaagtaaaa
gaatttttaacacgggaccaacttcgcttatatcgtttgatttgggaaagatttatcgcg
agccaaatgacgccagcagttcttgatacaatgcgcgttgacttagacaacaatggcgtg
aacttcagagcaaatggctctaaaattaaatttcacggcttcatgaaagtctatgtagaa
agtaacgatgataatacggaagaaaaagaaaatatcttaccagatttgaaaaaaggagat
aaggtacagtccgaatcactcgaacaacggcaacatttcacacagccacctccacgttac
acagaagctagattagtaaaaacgctcgaagaaattggtattggtcgaccatcaacttat
tcgccgacactcgacacaattcagcgcagaaattatgtttctttaacgaataaacgcttt
attccaactgaattaggtgaaatcgttaatgaaatgattgaagaatatttcccagaaatt
ttagatgtcaaattcactgccaacatggaaagtgagctcgatgaagtagagcacggagaa
gtcgaatgggtgaaagtcattgatgaattttataaacgatttgaaccaaatgttataaaa
gcagatgcagaaatggaaaaaatcgagattaaagatgaaccagccggaattgactgtgat
ctttgtggagctccaatggtttacaaaatgggtaaatacggtaagttcctagcttgtagc
agatttcctgattgtcgtaatacgaaagcaatcgtgaaagaaatcggcgttacgtgtccg
aaatgtgagaaaggacatgtaatagaaagaaaaagtaagaaaaagcgtattttttacggt
tgtgatcgttatccagattgtgactatgtatcatgggataaaccggtcgaacgggcttgt
ccgaaatgtgagaaacgagcattagtcgagaagaaattgaaaaaaggtgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacccaacaataa
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