Listeria monocytogenes 10403S (serotype 1/2a): LMRG_02127
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Entry
LMRG_02127 CDS
T01984
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmt
Listeria monocytogenes 10403S (serotype 1/2a)
Pathway
lmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMRG_02127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmt03019
]
LMRG_02127
Messenger RNA biogenesis [BR:
lmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMRG_02127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AEO06027
UniProt:
A0A0H3GJ95
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All DBs
Position
complement(1037195..1038862)
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AA seq
555 aa
AA seq
DB search
MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIY
EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQQ
VVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGS
QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKV
NNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMANGD
VLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRV
MAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttaaaaataatgagacagctgttttcgctcttggtggactaggcgaaatc
ggtaaaaacacatatggcgtacaatttcaagatgaaattattctaattgatgcaggaatc
aagttcccagaagacgaacttttaggtattgattatgttattcctgactacagttacctg
gttaaaaacaaagataagattaaaggactttttatcacccacggtcatgaagatcatatc
ggtggggttccttacctacttcgcgatcttaatatcccaatttacgctgggaaacttgcg
agtgcacttatccgcaacaaattagaagaacatggcttgcttcgtcaaaccaaaatttat
gaatatgaagaagatgacgtttttaaattcagaaaaacaagtatctctttcttccgtaca
acacatagtattcctgatacgtatggtattgttgtcaaaactccatctggtaacatcgtt
catactggtgacttcaagtttgattttactccagttggcgaaccagcaaacctgacaaaa
atggctgaaattggtaaagaaggcgttctttgtttactatctgatagtacaaatgcggaa
gtaccaaatttcaccatgagtgagcgtgtcgttggcgaaagtattaaaaatattttccgc
gatgtagaaggacgaattattttcgctaccttcgcatctaatatctaccgtttacaacaa
gtagtggaatcctctatcgaaactggtcgtaaaatcgctgtttttggtcgtagtatggaa
tctgctatggaaatcggtaaacaattaggctatattcaagcgccaaaagacacatttatt
gatgtgcatcaacttaataaaacaccagctggaaatgtgactatcctttgtacagggagt
caaggtgaaccaatggctgctctttctagaattgctaatggtacgcaccgccaaatccaa
attcaaccaggtgacacggtagtcttctcgtcttccccaatccctggtaatacaacgagt
gtaaaccgaacaatcaatttactttatcaagctggtgcagaagttatccatggtaaagta
aacaatatccatacttctggtcacggtggtcaacaagaacaaaaactaatgctacgtttg
atgaaacctaaattctttatgcctattcatggtgaattcagaatgcaaaaaattcatgca
gagtctgctgaagaatgtggtgttccggaagaaaatagctttattatggcaaacggagat
gtactcgcattaacgagtgaaacagctcatgttgctggtaaaatccatgcagcaagcgtc
tatattgatggtagcggtattggcgatatcggtaatattgtccttcgcgatcgtcgtatt
ctttctgaagaaggcctcgtaatcgttgttgtatccattgatatgaaaaattctcgtgtg
atggcaggacctgatattatttcacgtggcttcatttatatgcgtgaatccggtaatctc
atcggagaagcgcaaggcctcctaacgcgacacttaaacaaagtaatggaacaaaaaaca
acgcaatggtctgaaatcaaaaatgaaattacagatactttgcaacctttcttgtacgaa
aaaacaaaacgtcgtccaatgattttaccaataatcatggaagtatag
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