Lagopus muta (rock ptarmigan): 125685070
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Entry
125685070 CDS
T09141
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125685070 (MEX3D)
04121 Ubiquitin system [BR:
lmut04121
]
125685070 (MEX3D)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125685070 (MEX3D)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125685070 (MEX3D)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125685070 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-RING_2
KH_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125685070
NCBI-ProteinID:
XP_048783782
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All DBs
Position
26:complement(2436565..2444659)
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AA seq
604 aa
AA seq
DB search
MPGSIYQPDGGEAGRAPPRCLALLNPPPTPPSIVSTGQEPETETERREGPSQTQEEALRF
ALDQLSLLGLEETTEPGGGGGGGGGGGGGGGGGGEAEPEPPGNNPTLPGTSSSPPPPPSS
SSSSSSSSVFGNFAPNHHHHHHHHHHLPPLLTDQMNILGNRKKSVNMTECVPVPSSEHVA
EIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFIVTGRKEDVEMAKREILSAAEHFSMIRA
TRNKVNGLTGALQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSR
DKEPVFEVTGMPENVDRAREEIEAHITMRTGSFVDVNAENDFHTNGTDVCLDLQGGSAGL
WAKAPHPARRPAAALRNDSLSSLGSASTESFYSGRVADNSPTSPYSTGGGFTFSDAPAPL
GSEECDFGFDFLALDLTTPSAAAAIWSPFERAANPLQAFGGSQRRNSGTATPRHSPTLPE
STGGALEHPLARRIQSNPVSTLSWLPTQGSLSSFSTSTGYSSSSSLPGSVSAASGSPTDS
SSSDGHRKSSRECMVCFESEVIAALVPCGHNLFCMECAMRICGKAEPECPACHTPATQAI
HIFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccatctatcaacccgacggaggcgaggctggtcgagccccccctcgttgt
ttagctttattaaatcctcctccaaccccaccgtcgatcgtaagcaccgggcaggaaccg
gagaccgaaacggagaggagggaggggccgtctcaaacgcaagaagaagctttgagattc
gccttggatcaattatcgttattgggtttggaggaaacgaccgaaccgggggggggagga
ggaggaggaggaggaggaggaggaggaggaggagggggtggggaagcggaaccggagccc
cccgggaacaacccgactcttcccggtacctcttcttcaccaccaccaccaccatcatca
tcatcatcatcatcatcatcatccgttttcggcaacttcgcaccgaaccaccaccaccac
caccaccaccaccaccacctcccccctcttttaaccgaccagatgaacatcctcgggaat
aggaaaaaaagcgtcaatatgaccgaatgcgttcccgttcccagctccgaacacgtcgct
gaaatcgtgggccgtcaaggttgcaaaatcaaagccctgcgtgccaagacaaacacatac
atcaagacgccggtgaggggcgaggaacccatcttcatcgtcaccgggaggaaggaggat
gtggaaatggccaagagggagatcctctcagctgctgagcacttctccatgatccgagcg
acacgcaacaaagtgaatgggctgacgggtgccctgcagggtccccccaacctgccgggc
cagaccaccatccaggtgagagtcccataccgcgtggtggggctggtggtgggccccaag
ggagccaccatcaagcgcatccagcagcagacacacacctacatcgtgacacccagccgt
gacaaggagcccgtctttgaggtgacgggaatgcccgagaacgtggaccgggcccgcgag
gagatcgaggcccacatcaccatgcggacgggttccttcgtcgacgtcaacgccgaaaac
gacttccacaccaacggcaccgacgtctgcttggacctgcagggtggttctgccggtctg
tgggccaaagctccgcacccggcccgccggcccgcggccgcactgcgcaacgacagcctc
agctccctgggcagcgcctccaccgagtccttctacagcgggcgggtggcagataacagc
cccaccagcccctacagcaccggcggtggattcaccttcagcgatgcgccggccccgctg
ggctcggaggaatgtgacttcggcttcgacttcttggccttggacctgacgacgccgagt
gccgccgccgccatctggtcgcctttcgagcgtgctgccaaccccctgcaagccttcggc
ggctctcagagacgcaacagcggcacggccacaccgcgccattcacccactttgcccgag
agcaccggaggggccttggagcaccccttggcgcgccgcatccagagcaaccccgtcagc
accttgtcctggctgcccacccagggctcgctctcctccttctccaccagcacgggttac
tcctcctcctcatcgctgcccggcagcgtctcggccgcctcgggttcacccaccgactcc
agcagctccgacgggcatcgcaagagctctcgtgagtgcatggtgtgctttgagagcgag
gtgatcgccgccctggtgccctgcggccacaacctcttctgcatggagtgtgccatgcgc
atctgtggcaaggccgagcccgagtgccccgcgtgccacacaccggccacccaagccatc
cacatcttctcctag
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