Lagopus muta (rock ptarmigan): 125688407
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Entry
125688407 CDS
T09141
Symbol
PLXNB2
Name
(RefSeq) plexin-B2
KO
K06821
plexin B
Organism
lmut
Lagopus muta (rock ptarmigan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
TIG_plexin
PSI
RasGAP
Motif
Other DBs
NCBI-GeneID:
125688407
NCBI-ProteinID:
XP_048790468
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All DBs
Position
1:complement(20079997..20328046)
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AA seq
1845 aa
AA seq
DB search
MYYVEMASWIWTLSIVSCFCITFSRSEELKFFQSATELNHLTVDNDTGIIYLGVVNALYQ
LTENLVVRIHVETGPRKDNKKCTPPIEENQCKEAVLTDNYNKLLLLNKENKTIVVCGSLF
KGICATRDLENITKVTHYVETSGEKSFVASNDENVSTVGLITSLDNDQVLFVGKGNGPND
NGIIISTRQLHEKDGKDIFEMYSDSAAVKSAYHSSSTQQFVTVFEDKNYVYFIFNQQEKQ
PVNNRTLIARLCKDDAHYYSYFEMDLGCKDEDGSYDHCHSAYVTTPGKELAKSMAQQRQT
TDSASDDKVLVALFSKVNKDNGSLKSAMCVFSLRHINEKMEKNRDDCYTNKNTSMFYKLF
AVENPCGPHGQNASKNFPCGSEHLPYLLGSKNGVIEKPVLQKEGMNLTAVTVTVENGHTV
AFLGTSDGKILKVFLSSTVTEYSSLTIELNKPIKNDLVLDKTQEYLYVMTTDKVHRLPVQ
QCHKYSDCEKCMQAQDPYCGWCVREGRCTKRADCEMADKENDWLWSPSGTCMTIISADPQ
NMSRRAPAKVKLTVSPLPTLSTSDKLWCTFGETSHRAQLNEGVIICDPPDMIPPTPKGQD
HVSVPLQLTFGENRIFFASHTYPFYDCEEAMNLYENQPCYSCASNRWNCQWDWKKHICEE
SSSAQDVIKQNMEEECPQFLNPNPSIIPMEYRTTVHFEGRHLAYYQDEKFVVGNSQFEFE
APVEAAEEGRFSFMSKEFSYSANETLKLKLSIRTDKVKIDSKLMVTLYNCSYGRSDCSLC
LAAHEDYKCVWCEEDGKPSKCVYEKLCRAPPTNTCPYPEITRIEPKTGPLDGGILLTIMG
SNLGIKAEDVKNITVADKECIFKEEFYSVSTRIVCQVGEMKEPTQGQIEVNINGKLGKSP
SNVQFTYQDPQPTGIRPQSGPQAGGTTLTITGMNLATGSKKDVRVYLGSQPCNVTEFGDE
IVCVTGRNSKVEAVGVTMRYGETKIDVPVQFSYSENPTVTKFKPVNSFSSGGRNITVTGT
GFELIQSFSLMVHAERPEAGKLSSKTFVGNCVMRLNETTVVFSSLPILEDPENYNITTII
LMDHYQLVVKNESHSFTYVADPTFENFTDGIKKQVNKLINAKGSNLNKAMTIDEAQAFVG
DEPCNIKTLTETDLYCEPPEVQPQPKKRQKRDMINNLPEFIVKFGLREWVLGRVEYDTRV
SDIPLNLILPLVLIPMIAIIIISIICYRRQSQQAEREYEKIKSQLEGLEESVRDRCKKEF
TDLMIEMEDQTNDVNEAGIPVLDYKTYTDRVFFLPSKDGEKDVMITGKLDIPEARRQTVE
QALNQFSNLLNSKSFLINFIHTLENQREFSARAKVYFASLLTVALHGKLEYYTDIMRTLF
LELMEQYVVAKNPKLMLRRSETVVERMLSNWMSICLYQYLKDNAGEPLYKLFKAIKHQVE
KGPVDAVLKKAKYTLNDTGLLGDDVEYTQLTVNVYVQDGGTDSTPVKVLNCDTISQVKEK
IIDQVYRNLPCSQWPKAESVALEWRPGSTAQILSDLDLTSQRDGRWKRINTLMHYNVRDG
ATLILSKMGISQQPEDSQQDVPGERHALLEDENKVWHLVRPVDEIDESKSKRGSVKEKER
TKAITEIYLTRLLSVKGTLQQFVDDFFHSVLNSNHVVPPAVKYFFDFLDEQAEKHDIKDE
DTIHIWKTNSLPLRFWVNILKNPHFIFDVHVHEVVDASLSVIAQTFMDACTRTEHKLSRD
SPSNKLLYAKEISNYKKMVEDYYKGIRQMVPVSDQDMNTHLAEISRAHTDSLNTLVALHQ
LYQYTNKYYDEIINALEEDPAAQKMQLAFRLQQIAAALENKVTDL
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtattacgtagagatggcttcatggatctggacgctaagcattgtgagctgcttttgc
atcaccttttccagaagtgaggaactgaaattttttcagagtgccacagagctaaatcat
ctaacagtggataatgacactggcataatctatttgggagtggtaaatgctctgtatcag
cttacagaaaatctggtggtacggatacatgtggaaacggggccaagaaaggacaacaaa
aaatgcacacctcccattgaagaaaatcaatgtaaagaggcagtactgactgacaattac
aacaaattattgttgctgaacaaggaaaataaaacaattgtggtgtgtggaagccttttt
aaagggatttgtgccaccagagatctagaaaacattaccaaagttacgcattatgtggaa
accagtggagagaagtcctttgtagcaagcaacgatgagaatgtgtcgacggtggggctg
atcacttccttggacaatgatcaggtgctgtttgttgggaaagggaatgggccaaatgat
aatggaataataatcagcactcggcagctccacgagaaggacgggaaagacatttttgaa
atgtattcggactcggcggctgtaaagtcagcctatcattcttcaagcacacagcaattt
gtgacagtctttgaggataaaaattacgtttatttcatttttaaccagcaagagaagcag
cctgtcaataaccgcacactaattgcacgtctttgcaaagatgatgcccattattattcc
tactttgaaatggacttgggttgcaaagatgaggatggttcctacgaccactgtcattct
gcttacgtcaccaccccaggaaaagagctggccaagagcatggctcagcaaagacaaact
acagattctgcctcggatgacaaagtgcttgttgcactcttcagcaaagtaaacaaagat
aatggctccttaaaatctgccatgtgtgtgttttcgttgaggcacatcaatgaaaaaatg
gagaaaaaccgggatgattgctacacaaataagaataccagcatgttttacaaactcttt
gcagtagaaaacccatgtggaccacatggacagaatgcaagcaaaaatttcccctgtggc
tctgaacacttaccgtacctcttgggaagtaaaaatggtgttatagagaagccagtatta
caaaaagaagggatgaatctcacggctgttactgtgactgtggagaatgggcacaccgtg
gcctttctggggacttcagatggaaaaattcttaaggtgttcctgtcatccactgtaact
gaatacagttctctgactattgaactaaataaacccataaagaatgatctggtccttgac
aaaacccaagaatatctatatgtgatgaccacagacaaggtgcatcgccttcccgtacag
cagtgccacaagtactcagactgtgagaagtgcatgcaggcccaggacccgtactgcggc
tggtgtgtgcgggagggcaggtgtacaaagagggcagactgtgaaatggctgataaggag
aacgactggctctggagtccaagtggtacatgtatgactatcatcagtgcagaccctcaa
aacatgagtcgtagagctcctgctaaggtgaaactgacagtaagtccattgccaactttg
agcactagtgacaaactttggtgtacctttggtgaaacaagccatcgtgctcaattaaat
gaaggagttataatctgtgacccacctgatatgattcctccaactccgaaaggtcaagat
cacgtttcggttccattacagttaacctttggagagaacaggatattttttgcatctcat
acttaccctttttatgactgtgaagaagcaatgaatctttatgaaaaccagccatgctat
tcttgtgcaagcaataggtggaattgccagtgggactggaagaaacatatctgtgaagag
tcttcttcagcacaggatgtgatcaaacaaaatatggaggaagaatgcccacagtttcta
aaccctaacccatcaataatacctatggagtaccgaacaacagtgcattttgagggaaga
catctagcttattatcaggatgaaaaatttgtggttggaaacagccagtttgaatttgaa
gctcctgttgaggcagcagaggaaggaagattttcattcatgagtaaagagttctcctat
agtgcaaatgaaaccttaaaacttaaattatccataagaacagacaaggttaagattgac
agcaaactgatggtgaccctgtacaattgttcctatggacgcagtgactgcagtttgtgt
ctcgctgcccatgaagactacaagtgtgtctggtgtgaagaggatggcaaaccaagcaag
tgtgtgtatgagaagctgtgtcgtgctcctcccaccaacacgtgtccttatccagaaatt
actcgcattgagccaaagactggaccactggatggtggaattcttttgaccataatggga
tctaatttgggaataaaagcagaagatgtaaaaaatataacagtggcagacaaggaatgt
attttcaaggaggaattctactctgtttccacaaggattgtgtgtcaagttggagaaatg
aaggaacctacacaaggtcaaattgaagttaacatcaatggaaaattaggtaaatcacca
agtaacgtgcagtttacataccaggaccctcagcctactggaataagacctcaaagtggt
ccacaagcaggtggaaccacacttaccatcactggtatgaacctggcaactggttccaag
aaggatgttcgtgtttatctcggtagccagccttgcaatgtcactgaatttggagatgag
attgtttgcgttacaggacgtaatagcaaggttgaagctgttggagtcacaatgcgctat
ggggaaacaaaaattgatgtaccagtgcaattttcatacagtgagaatcctactgtcacc
aagttcaagcctgtaaatagtttcagcagtggagggagaaacattacagtaactggaact
gggtttgaactgatccagagtttctcactgatggtacatgcagagcgtccagaagcaggc
aaactgagctccaaaacgtttgttggaaactgtgttatgagacttaatgaaaccacagtg
gttttttcttcactaccaatattggaagatccagaaaactataacattaccactattatt
ctaatggatcattatcagttggttgtaaaaaatgagagccattcatttacatatgttgca
gacccaacctttgaaaatttcacagatggcatcaagaagcaagtcaacaaacttataaat
gcaaagggcagtaacctgaacaaagccatgaccattgacgaggcccaggcttttgtaggt
gatgagccttgcaacataaagacactgactgaaacagacttatattgtgagccgcctgaa
gtacagccacagccaaagaaaaggcagaaaagggatatgatcaataaccttccagaattc
attgtgaaatttggactccgtgaatgggtccttggaagagtggaatatgatacacgtgtg
agtgacatcccactgaatcttattttgccactggtacttattcctatgatagcaatcatc
atcatttctatcatctgttacagacggcagagccagcaagcagaacgagagtatgaaaaa
attaaatctcaacttgaaggcctggaggagagtgtcagagaccggtgcaagaaggaattc
acagatctaatgatagagatggaggatcagacaaatgatgtaaatgaagctggaatccca
gtactggactacaaaacatacacggacagagtcttcttcttgccctccaaagatggggag
aaggatgtgatgattacaggcaagctggatattccagaggctcggcggcagactgtggag
caggctctgaaccagttctccaacctcctcaatagcaaatcatttctcattaattttatt
cacacgctggaaaaccaaagggagttctctgctcgagctaaagtgtactttgcatcttta
ctgacggttgctttacatggaaaactagaatactatactgacatcatgaggacgctgttc
ttagaactgatggagcagtatgtggtggccaaaaacccaaagctgatgctaagaagatct
gaaacagttgttgagagaatgttgtctaactggatgtctatttgtttatatcagtacctc
aaggacaatgctggggagcctctttacaaattgttcaaagccatcaaacaccaagtagag
aaaggtccagtggatgctgttctgaagaaagccaagtatacgctgaatgacacaggctta
ctaggagatgatgtcgagtatacacagttgacagtaaatgtgtatgtccaggatggagga
actgattctacacctgtgaaagtgctgaactgtgacaccatatcacaagtaaaggaaaag
ataatagaccaagtctatcgaaatctgccatgttctcagtggccaaaagctgagagtgta
gctcttgagtggcgtccaggctctactgcacagatcctctcagacttggatttaacatcc
caaagagatggcagatggaaacgtatcaacaccctgatgcattataatgtccgagatggt
gccacactcatcttatcgaaaatgggaatttcccagcagccagaagatagtcagcaagat
gtccctggggaaaggcatgcgcttctggaagatgaaaataaggtctggcacctcgtccgg
ccagtagatgaaattgatgaaagcaaatcaaagagaggcagtgtgaaagaaaaagagaga
accaaagctattacagaaatctacctgacaagacttctctctgtgaagggaacacttcag
cagtttgtagatgacttctttcatagtgtgctcaactcaaaccatgtagtgccaccagct
gtgaaatacttctttgactttcttgatgagcaagcagagaaacacgacatcaaggatgaa
gataccattcacatctggaaaacaaacagcttgcctcttagattctgggtaaacatactg
aaaaatccccatttcatctttgatgttcacgttcatgaagtagtggatgcttccttgtca
gtcattgcacagactttcatggatgcttgcacaagaacagagcacaaattaagcagagat
tctccaagtaataaattactttatgcgaaagagatctctaattataagaaaatggtggaa
gattactacaaaggtattcgtcagatggtaccggtcagtgaccaagatatgaatacccat
ctagcagaaatctctagggcacatactgattccttgaacacgcttgtggctctacaccaa
ctctaccagtacactaacaaatactatgatgagattataaatgcacttgaagaggatcca
gctgcacaaaaaatgcagcttgccttccgtttacagcaaatagcagctgcgttagagaat
aaagtgactgacctttga
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integrated database retrieval system