Lagopus muta (rock ptarmigan): 125694238 Help Entry 125694238         CDS       T09141                                  Symbol CDH23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism lmut  Lagopus muta (rock ptarmigan) Brite KEGG Orthology (KO) [BR:lmut00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:lmut03037]     125694238 (CDH23)    04515 Cell adhesion molecules [BR:lmut04515]     125694238 (CDH23) Cilium and associated proteins [BR:lmut03037]  Primary cilia and associated proteins   USH complex and associated proteins    125694238 (CDH23) Cell adhesion molecules [BR:lmut04515]  Cadherins   Major cadherins    125694238 (CDH23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 RET_CLD1 DUF6377 Motif Other DBs NCBI-GeneID:  125694238 NCBI-ProteinID:  XP_048803113 LinkDB All DBs Position 5:complement(41498641..41628298) Genome browser AA seq 1889 aa AA seqDB search MVGRRVAVVLARDPDAGSNGQVTFSLTAGNVGQAFEIRTTNNTYGEVLVARPLDRELLDH YTLRIQASDGGVPPRRKEHTLRVTILDVNDNPPVIDSPFGYNVSVSENVGGGTAVVQVRA TDRDAGLNSVLSYYITRGNEDLTFRMDRVTGEIATRPSPPDRERQSSYCLLVTVEDEGNP SLSATTTVFVTILDENDNAPVFQQQLYEVTLDEGPATLNATLVTVQALDRDEGPNGTVTY AITEGNILGTFHINSTTGQIRTLKELDYEISHGRYTLVVTATDQCPIASRRLTSTTTVLV NLNDINDNCPTFPRPYEGPFDVTEGQPGPRIWTFLAHDGDSGPGGQVEYSIIAGDPLGEF VISPVEGELRVRKDAELDRENIPFYNLTISARDRGVPPLSSTMLVGVRVLDVNDNDPVLL NLPMNITLSEHAPVSSFVTRILAQDADQGPNALLTFDITAGNKESAFYINSTTGIIYVNR PLDRERVAEYRLTITVKDNPENIRNARRDFDLLVISIADENDNHPLFTQSSYQAEVMENS PPGTPVTILNGPILALDGDQGSNAMVTYQLLATSLDLFIINNRTGVVSVKPGSVIDREAL LDPLLDFTLVAVDTGGLNSTASLTVTILDDNDNRPVFQPVSITARLRENSPPGFSVLQVT ATDADSGLNKQLDYRIEGGGQDRFLIDATTGVIRVANLSIDREERDAYRLTVVAVDQGTP ALSGTATISILIDDVNDCRPEFINPIQTVSVPESAIPGTVVAEVTAIDRDLHPRLEYYLL EIVARDDTDALVPDQQEAFTVDFRTGAVKIKTPLNRELVATYEVTISVHDNASEVIDRSV SVPNAKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDPDKGANGQIT YELLDLSPEGYACLEDQSAGKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQI VDVNDNNPIFSQTSYQKAVFEDVPLGTVILRVKATDADSGRFALIQYSLRDGEGKFGINP ETGDIYILSALDREKKDHYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKS QFSTSVYENEPAGTSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQ SYERFNLTVVATDKGRPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNV YEVYATDKDEGLNGAVLYSLLKTGAGNKDWEYFSIDAVSGLIQTAMRLDREKQAVYNLII VASDQGQPTYETMQPLQVALDDIDDNEPIFLRPPRDSPQYQALSVPEHSQPGTVVGNVTG AVDADEGSNAIVYYFIAAGNQESNFLLSREGKLQVLRDLDREKEPYYSIIVKASSQRNWS PPRGQHAGRAQPWDLSTDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAKVGSELIKV LAVDADVGNNSLVLYSILGIRYIKQHSNDSEEVANIFSIGTLDGILRTFDLFTAYNPGYF VVDIMASDLVGHNDTAIVGIYILRDDQRVKIIINEIPDKVRQFEEEFISLLSNITGAIVN TDDVQFHVDKKGRVNFAQTELLIHVVNRETNRILDVERVIQMIDENKEQLRNLFRNYNVL DVQPAITARAPDDLSALQMAIIVLAVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGN RGFMDIMDMPNTNKYSFDGANPVWLDPFCRTMELAAQAEHEDDLPENLSEITDLWNSPAR THGTFGREPSAAKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKLIQKDLEEDEERCPSQG SLRFRHKQPVELKGPDGIHVVHGSTGTLLASDLNSLPEDDQKVLGRSLETLTADCGAYDH NARTESAKSTPLHKMREVIMESPLEITEL NT seq 5670 nt NT seq  +upstreamnt  +downstreamnt atggtgggcaggagggtggctgtggtcctggctcgtgaccctgacgcaggcagcaatggg caggtgacattctcactgacagcagggaatgtggggcaggcgtttgagatccgcaccact aacaacacctatggagaggtgctcgtggctcggccgctggaccgggagctgctcgatcac tacaccctgcggatccaagcttcagatggtggcgtgcccccccggaggaaagagcacacc ctgcgggtcaccatccttgacgtcaacgacaacccgcccgtcatcgatagcccctttggc tacaatgtgagcgtgagtgagaacgtcggtgggggcacggcagtggtccaggtgcgcgct accgaccgggatgctggcctcaacagcgtcctgtcctactacatcacccgcgggaacgag gatctcaccttccgcatggaccgagtcaccggcgagatcgctacacggccctccccacca gaccgtgagcggcagagctcctactgcctgctggtcactgtggaggacgagggcaacccc tcactgtcggccaccaccacagtgtttgttaccatcctggacgagaatgacaatgctcca gtgttccagcagcagctgtacgaggtgacgttggatgagggccctgccactctcaatgcc acactcgtcaccgtgcaggccctggaccgggacgaagggcccaatggcacggtgacatac gctatcactgaaggcaacatcttgggcactttccacatcaacagcaccacgggacagatc cgcaccctgaaggagctggactacgagatcagccacgggcgctacaccttggtggtcact gccactgaccagtgccccatcgcctcgcgccggctgacatcaaccaccacggtgctggtg aatctcaatgacataaatgacaactgtcccaccttcccacggccctacgaaggccccttc gatgtgacagagggacagcctggcccccgcatctggaccttcctggcccacgatggggac tcggggcccggtgggcaggtggagtacagcatcatcgctggggaccctctgggggagttt gtgatctccccagtggagggggagctgcgggtgcggaaggatgctgagctggaccgtgag aacatccccttctacaacctcactatctccgcccgggaccggggtgtgcccccactcagc tccacgatgcttgtgggtgtgcgtgtgctggacgtcaatgacaacgaccccgtgctcctc aacctgccaatgaacatcaccctcagtgagcacgccccggtctccagcttcgtcacacgc atcctcgcccaggacgcagaccagggcccgaatgccctccttaccttcgacataactgct ggcaacaaagagagtgccttctacatcaacagcaccaccggcatcatctacgtaaaccgc cccttggacagggagcgggtggcagagtacaggctgaccatcacggtgaaggacaaccct gagaacatccgcaatgccaggcgggattttgacctgctggtcatttccatagcggatgaa aacgacaaccaccccctcttcacccagagctcctaccaggccgaggtgatggagaactca cccccgggaactccagtcaccattctcaatggacccatcctagctttggacggtgaccag ggcagtaatgctatggtgacctaccagctcttggcaacatccctggacctcttcattatc aacaataggacaggtgttgtttcagtgaagcctggtagtgtgatagaccgtgaagctttg ctggacccactgctggacttcacgctggtggccgttgacactggggggctgaacagcacc gctagcctcacagtgaccatcctggatgacaatgacaaccgccctgtcttccagccagtg tccatcacagctcggctgagggaaaacagccccccaggcttttccgtcctccaggtgaca gccacagatgcagacagtggcctcaacaagcaactggattacaggatcgagggtggaggc caggacaggttcctgattgatgccaccacgggggtgatccgtgtggccaacctcagcatt gaccgggaggagcgggatgcctatcggctgacagtagtggccgtggaccagggcacaccg gctctctcaggcactgccaccatcagcatcctcattgatgatgtcaatgactgccggcct gaattcatcaaccccatccagacagtcagtgtgcctgaatcagccatccctggaaccgtg gtggccgaggtgaccgccattgaccgagacctccatccacgcctggagtactacctgctg gagattgtggcccgtgatgacacagatgcactggtgcccgaccagcaggaagcattcacg gtggattttaggacaggagctgtgaagatcaaaacccccctcaaccgggaacttgtggcc acctacgaggtcaccatctccgtccatgacaatgccagtgaagtcattgaccgctcagtc agcgtgcccaatgccaaactgacagttaacgtcttggatgtcaatgacaacacgccacgc tttcgtccattcggggtcacctatttcaccgagcggatcctggagggagccacacaaggc accacactcatctccatctcagcagtggatccagacaaaggagccaatgggcagatcacc tatgagctgctggacctgtccccagaaggctatgcctgcctcgaagatcagtcggcaggg aaggtcgtggccaacaggacagtggactatgaggaggtgcagtggctgaacttcactgtc cgagcttccgacaacggctctccccgcagatccgccgagatccctgtgtacctccagata gtggacgtcaatgacaacaaccccatcttcagccagacgtcctaccagaaagctgtcttt gaggacgtgccgttgggtacggtcatcctgagggtcaaggccacggatgcggattctggg cgctttgctctcatccagtacagcctaagggatggagagggcaagtttgggataaatccc gaaacgggtgacatctacatcctgtcagccctggaccgggagaagaaggaccactacacg ctgacagctgtggctagggacaaccctggggatatctccagtaaccgtcgggagaactct gtgcaggtactgatcaccgtcctggacatcaatgacttcagaccgcagtttagcaagagc cagttcagcaccagcgtctacgagaatgagccagcaggtacatcagtgatcaccatgacc gcaacagacctggatgagggggacaacggtgtggtgacctatagcattgaaggtcctgga gcagaggccttcaaaatcaataaggactctggccttatcacatcccggcggcgcttgcag tcctatgagagattcaacctgactgtggtggccacagacaaaggtcgtcccccactctgg gggaccaccatgcttcacatcgaggtcattgacatcaacgacaaccgccctgtctttgtc cgcccacccaatggcaccattctgcacatcaaggaggagatccctctgcgctccaacgtc tacgaggtctatgccactgacaaggatgagggtctcaatggggcagtactgtacagcctc ctgaaaactggggcagggaacaaggactgggagtatttcagcatcgacgctgtcagtggg ctgatccagacggccatgcggttggaccgggagaagcaagcagtgtacaatctgatcatt gtggcctctgaccagggccagccaacctatgagacgatgcagcccctccaggtcgcgctc gatgacattgatgacaatgagcctatcttcctcaggccacctagagacagtccccagtac caggcactctccgttcctgagcactcgcagcctggcaccgtggtgggcaatgtcactggt gcagtggatgcagatgagggctccaatgccatcgtctactacttcatagcagctgggaac caagagagcaacttcctgttgagccgggaggggaagctccaagtcctgcgcgacctggac cgcgagaaggagccctactactccatcatcgtcaaagcatccagccagaggaactggtcc ccaccccggggccagcatgcaggcagagcacagccctgggacctcagcacagatctgact cttcaggaagtgcggatcttcttggacgacatcaatgaccagtccccccagttcaccaag tcggagtacacagcgggcgtggccacagatgccaaggtgggatcagagctgatcaaggtc ttggccgtggacgctgatgtgggcaacaacagcctagtcctgtacagcatcctggggatc cgctacatcaagcagcactctaatgattctgaggaggtggccaacatcttcagcattggt actcttgatggcatcctaagaacctttgatctcttcacggcctataatcctggctacttt gtggtggacatcatggcctctgacctggtgggccacaatgacacagccattgtggggatc tacatcctgcgggatgaccagagagtcaaaattatcatcaatgagatccccgataaggtc aggcagtttgaggaggagttcatcagtctgctttccaacatcacgggtgccatcgttaac actgatgatgtgcagttccatgtggacaagaaaggccgggtgaactttgcacagacagag ctgctgatccatgtggtgaacagagagaccaaccgcatcctggatgtggagcgggtgatt cagatgattgatgagaacaaggagcagctgaggaacctcttcaggaactataatgtgctg gatgtacagcctgccatcactgcccgtgccccggacgacctctcagctctgcagatggcg atcatcgtgctggctgtcctgctcttcctggctgccatgctcttcatcctcatgaactgg tattaccgcaccgtgcacaaaaggaagctgaaagccattgtggcgggctccacaggcaat agaggcttcatggacatcatggacatgccaaacaccaacaagtactcctttgatggggcc aaccccgtgtggctcgaccccttctgccggaccatggaactggcggcacaagcggagcat gaagatgaccttccagagaacctgagcgagatcactgacctctggaacagcccagccagg acccatggcacctttggcagagagccctcagctgccaagcctgaggatgaccgctacctg cgagccgccatccaggagtacgacaacattgccaagctggggcagatcatgcgcgaggga cccataaagcttatccagaaggatctggaggaggacgaggagcgctgccccagccagggc agcctgcgctttcggcacaagcagccagtagaactgaaaggccctgatggcatccacgtg gtgcacggcagtacaggtacgctgctggcctctgacctcaacagcctccctgaagatgac cagaaggtgctggggcgctcgctggagactctgactgccgactgtggggcttacgaccac aatgcccgcaccgagtcagccaaatccacccccctgcacaagatgcgggaggtgatcatg gagagcccactggaaatcactgagctatga

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