Lagopus muta (rock ptarmigan): 125695369
Help
Entry
125695369 CDS
T09141
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04150
mTOR signaling pathway
lmut04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125695369 (LRP5)
04150 mTOR signaling pathway
125695369 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125695369 (LRP5)
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125695369 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125695369
NCBI-ProteinID:
XP_048805640
LinkDB
All DBs
Position
6:16255964..16391773
Genome browser
AA seq
1614 aa
AA seq
DB search
MEAAPPLLLLLRLLAASVLRCEPGSAGASPFLLFANRRDVRLVDAGGTKLESTVVVSGLE
DAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGKKLY
WTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDS
STRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFAL
TLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPCEENN
GGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKSGAEEVLLLARRTDLRRISLDMPDFT
DIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSGAQTLVTTEINHPDGIAV
DWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGESPK
IECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTDKIEVINVDGTMRKTLLED
KLPHIFGFTLLGDYIYWTDWQRRSIERVHKIRASRDIIIDQLPDLMGLKATSVTKVFGTN
PCAENNGGCSHLCFFTPQETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISLETN
NNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGM
AVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEWGGK
PRIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREIIAD
DLPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSRQDGL
NDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPTSFLLFSQKSAISRMIPDD
QQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSSPNQSQN
PEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLNGESIGMVLRGDHDKPRAIVVNAERGYM
YFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDL
SGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTNGYKRTRIQGRIAHLTGI
HAVEELDMEEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPPTCSP
DQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSASQFQCEKGQCIDAHLRCNGEI
DCQDKSDEVDCDTICLLNQFRCASGQCILLKQQCDSFPDCIDGSDELMCEKSKPSSDEPQ
PHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNFIAPG
SSQHGTFTGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQILNPP
PSPATDRSLYNAEMFYSSNIPSTTRSYRPYLIRGTAPPTTPCSTDVCDSDYTTSRWKANK
YYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccgccgctcctgctgctgctgcggctcctggccgcctcggtgctgcgc
tgcgagccgggctcggccggggcgtctcccttcctgctttttgccaaccgtcgggatgtt
cgactcgtggatgctggaggcacaaagctggagtccactgtggtggtcagtggtttagag
gatgctgctgcggttgacttccagtattcgcaaggcatcgttttctggacagatgtgagc
gaagaagccatcaagcaaacttatattaaccaaactgggaatgtggtgcagaatgtcatc
atttctggtctggtttccccggatggcctggcatgtgattggattgggaaaaaactttac
tggacagattcagaaaccaataggatagaagtcgctaatctcaatggaacatctagaaaa
gtcctcttctggcaagaccttgatcagcccagggcaatagctttggatccagctcatgga
tacatgtattggactgactggggcgaaacgcccagaatagaacgggcaggaatggacagc
agcacacggaaaataattgttgattcagatatctattggccaaatggactcacaatagat
cttgatgagcagaaactttactgggctgatgcaaaattgagtttcattcatagagcaaat
ctggatggctcctttaggcaaaaggttgttgaaggaagtcttactcatccatttgcgttg
acactgtctggggacactttgtattggacagactggcagacacgttccattcatgcctgt
aacaaacggacaggagagaagaggagagaaatactatcagctctttattcacccatggac
atccaggtcttaagcccagaccggcagccctactttcacactccatgtgaagaaaacaat
ggtggttgctcccatctgtgcctgctatcaccaagagaccccttctacagctgtgcctgt
cccactggtgtgcagctagaagatgatggcaggacgtgcaaatcaggtgctgaagaagtg
ttgctgcttgctaggaggactgacttgagaaggatttccttggacatgccagacttcact
gacattattctgcagatagacaatatcagacatgcaattgccatagactatgatcctgtg
gaaggctacatctactggactgatgatgatgttcgggcaattcgtcgggcgtaccttgat
ggctcaggagcacagactctggtaaccacagaaatcaaccatccagatggaattgctgtg
gactgggtggcaaggaacctgtactggactgatactggaacagaccgcattgaagtgacc
cgtttgaatgggacatcgagaaagatccttatatcagaaaatctagatgaacctcgtgca
atcgtgctcaatcctgtcatgggctacatgtattggacagactggggtgaaagtccaaag
atagaatgtgcttatttggatggatcagagaggagagttctggtgaatacatccctaggt
tggcctaacggcttggcattggatcttgaagaggacaaactttactggggagatgcaaaa
acagataaaattgaggtcataaatgttgatggaacgatgaggaaaaccctcctagaagat
aaacttccgcatatatttgggttcacactgctgggtgattacatctactggactgactgg
cagaggcgaagcattgaaagagttcacaagataagggctagcagagacatcattattgat
cagctgccagacttgatgggccttaaagcaacaagtgttaccaaagtttttgggactaat
ccatgtgcagagaacaacggaggctgcagccatctgtgtttctttacaccccaggagacc
aggtgtgcctgtcccattggccttgagctgttgagtgacatgaagacttgcatcattcct
gaagccttcttagttttcacaagcagagcagcaattcataggatttcccttgaaaccaat
aataatgatgttgctattcctcttactggagtcaaggaggcatctgctctggattttgat
gtttctgataacagaatctattggactgatgttagtttgaagaccataagtcgagctttc
atgaatgggagctctgttgaacacgtgattgaatttgggctagattaccctgaaggaatg
gctgtagactggatgggaaagaacctctactgggcagatactggaactaatcgaattgag
gtagcccgcctggatggacagtatagacaggtccttgtgtggaaggacttggacaaccca
aggtctttggctcttgatcctaccaaagggtacatgtactggacagaatggggaggtaag
cctaggatcgttcgagcatatatggatggaacgaacagcatcactttggtggataaagtg
ggtcgtgccaatgacctcacaattgattatgccgaccaacggctgtattggactgactta
gacaccagcatgattgaatcgtcaaatatgctaggacaagaacgagaaatcatagcagat
gatctacctcatccatttgggttgacccagtacagtgactacatctactggacagactgg
aatcttcacagtattgaaagagcagacaagaccaatgggaagaacaggacgcttattcag
ggccatctggattttgtgatggatattttggtcttccattcttcacgtcaggatggcttg
aatgattgtgtgcaaaataatggccattgtggtcacctgtgccttgccataccaaatgga
tttagatgtggctgtgctgcacattataccttggatcccaacagcaggaactgcagttct
ccaaccagtttcctgttgttcagccagaaatctgccatcagccgaatgatacctgacgat
cagcaaagtccagatatcatcctgcctatgcatggtctaaggaacgtgaaggctattgat
tatgatcccttagataaattgatttactgggtagatgggcgtcagaatattataaaaaga
gccaaagatgatggcactcagccttttactgtcatgagctctccaaaccaaagccagaac
ccagagaagcagccacatgacctcagcattgatatatacagccataccttgtactggacc
tgtgaggccacaaactccgtcaacgttcacaggctgaacggcgagtcaatagggatggta
ctgcgaggcgaccacgacaagcccagagccattgtagtgaatgcagagcgggggtacatg
tatttcaccaacatgcaagagcgagctcccaagattgagcgtgcagcccttgatggcaca
gagagggaagtgcttttcacaactgggttgatccgaccagtagcactggtgattgacaac
aaactcgggaagcttttctgggtggacgcggatctgaagcgcatcgaaagctgtgacttg
tcaggtgctaaccgtgtgactctggaggactccaacatccttcagccaatgggactgact
gtgctggggaatcacctgtactggattgatcggcagcagcagatgattgagagagtggag
aaaactaatgggtacaaaaggactagaattcaaggccgaattgctcacctaacaggcatt
catgctgtggaggaacttgatatggaggaattctctgcacatccgtgctcccgtgacaat
ggtgggtgctcacacatctgcattgccaaaggggatgggactccaagatgttcatgccca
gagcaccttgtgctcctgcagaatctcttaacatgtggagaacctccaacttgctcccca
gaccagtttacctgtgcaactggagagattgactgtatcccaatggcatggcggtgtgat
gggttccctgagtgtgatgaccagagcgatgaggatagttgtccaatatgctctgcatct
cagttccagtgtgagaaaggacaatgtattgatgcgcacctgaggtgtaatggagaaatt
gactgccaagataaatctgatgaagtggattgtgatacaatttgtctgctcaatcagttc
cgatgtgccagtggccagtgcatccttctgaagcagcagtgtgactcctttccagattgc
attgacggctcagatgagctcatgtgcgaaaaatcaaagccatcctcggatgaacctcag
ccccacagcagtgccatcggtcccgtcattggaataatactttccctttttgtcatggga
ggaatgtactttgtttgccagcgagtggtgtgtcagcgctacgccgggcccaacagcccc
tttccacatgagtatgtcagtggcacgcctcacgtccctcttaattttattgctcctgga
agttctcagcatggcacttttactggcatctcttgtggaaagtctatgattagctccatg
agcctaatgggagggagcagtggtgcccccttatatgacagaaaccatgttactggagcc
tcttctagtagctcatccagcactaaagccactttctacccacagatcttgaacccccct
ccatccccagctactgatcgctccctgtacaatgcagagatgttttattcttcaaacatt
ccttcaaccacaagatcttacaggccttaccttatacgagggacagctccacccacaacc
ccgtgcagcacagatgtttgtgacagtgactatactactagtcgatggaaagccaacaaa
tactatatagatttaaattcagactcagacccttacccccctccacccacgcctcgcagc
cagtacatgtcggcagaagaaagttgccctccatctcctgccacagaacgaagctacttt
cacctctacccacctccaccctctccttgtacagactcctcatga
DBGET
integrated database retrieval system
