Lagopus muta (rock ptarmigan): 125703598
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Entry
125703598 CDS
T09141
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04140
Autophagy - animal
lmut04148
Efferocytosis
lmut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125703598 (VPS11)
04148 Efferocytosis
125703598 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125703598 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125703598 (VPS11)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125703598 (VPS11)
Hops complex
125703598 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
BLOC1S3
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125703598
NCBI-ProteinID:
XP_048824243
LinkDB
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Position
22:complement(56984..67744)
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AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDREMVKEPPGPEGAGGKPFVLPPGITVCDSGRGNLVFGDMEGRIWFL
PRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDVIDVLAEWGSLYVLTRDGKIHALQEKDAQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSTKLEEFIKASESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKIL
MHHVPKETTELLKNLCTDYQPSGNSEGPGILEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQSDSPQGVYDTLLELRLQNWAHELDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQK
IQKYRDETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPLGKSATTIEAGLQRELLMHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctacctgcagtggcgccgctttgtcttcttcgacagagagatggtgaaggag
ccgccggggccggagggggctggtgggaagcccttcgtgttgcctccgggcatcacggtc
tgtgattcaggccggggtaaccttgtgttcggagatatggaaggtcgaatctggtttttg
cctcgctcacttcaactcagtggtttccaagcttacaagttaagggtaacgcacctatac
cagctgaagcagcacagcatcttagtttctgttggtgaggatgaagagggcattaaccct
ttggttaaagtatggaatctggaaaaacgagatggtggcaatcctctttgcacacgaatt
tttccagcgataccaggtaacaagcccacggttgtgtcctgtcttactgtccatgagaat
ctgaatttcatggctattggttttgcagatgggagtgttgtgcttacaaaaggagacatc
actcgagatcggcatagtaagacccagatcctacatgaaggcagttacccagttactggt
cttgcttttcgacagtctggcaaaacaacgcatctgtttgtggtgaccacagagaatatc
cagtcctacctgctttctgtgaaagactattctcatctggagctggacactcatggctgt
ggattgcgctgttcttctctgagcgacccctcccaggacctccagttcattgtagcagga
aatgaatgtgtatacctttatcaaccagatgaacgaggcccctgctttgcttttgaggga
caaaagctgattgttcactggtatcgggggtatctcatcattgtctccaaggaccgaaaa
acttctcctaagtcggagtttgctggaaacgaggcacagaattcagacaaacaagttctg
aatatctacgacttgtgcaacaaattcattgcgtacagttcaatctttgatgatgtaata
gatgtcttagcagaatggggttctttgtatgttctgaccagagatgggaagatccatgca
ctgcaggagaaggatgcccaaaccaaacttgagatgctcttcagaaagaacttatttgaa
atggccattaatctagccaagagtcaccacttggacagtgatggcttgtcagagattttc
cggcagtatggtgatcatctttataacaaggggaaccatgatggagccatccagcaatat
atccgaactatagggaaattggaaccatcttatgttattcggaaattcctagatgctcag
cgcatccacaatctcactgcttatctgcagacactccacctgcaatctcttgccaatgca
gaccatactacacttctgctgaactgctatactaaactcaaagatagcaccaaattggag
gagttcattaaggctagtgagagtgaagttcgctttgatgtggaaacagcaatcaaggtg
cttcgtcaagcaggttactactcccatgctgtgtacttggcagaaaagcatgcccatcat
gaatggtacctcaaaatccagctagaagacattaagaactatcaagaggctttgcactac
attggaaaactgccttttgatcaagcggagagtaacatgaagcgatatggtaaaatcctg
atgcaccatgtccctaaagagacaacggaactactgaagaacctttgcactgattaccag
ccatcagggaacagtgaaggccctgggatcctggaaggaaaaaaggccaattctgaggag
ttcattccagtctttgcaaacaactcccgagaactgaaggcttttctggagcacatgact
gaggtgcagtctgactctccacagggtgtatatgacactttattggaacttcgtctccag
aattgggcacatgaactagataagcagatcaaggagaagctgcacgatgaagcactcact
ctcctgaagagtggaagattcaaaacagtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgtcctctacctctatgaacagggcaaactttttcaacagatc
atgcattaccacatgcagaacgagcagtacaagaaagtgattgaagtgtgcgagttgtac
ggggaccaagaggcttgtctttgggaacaggctcttggctactttgcacggaaggaggaa
gactgcaaggagtatattgctgcagtgctaaaacacatagagaacaagaatcttatgcct
ccacttcttgttgtgcagacactggctcacaactccacagccacattgtctgtgattaag
gattatcttgtcaacaagctgcagaagcagagctgccagatagagcaagatgggcagaaa
attcaaaaataccgggacgaaactacaaggatccgtcaagagatcgaagagctaaaagca
agtcccaagatctttcagaagaccaagtgtagcatttgcaccagtgccctggagctgccc
tcggtccatttcctgtgtggtcattccttccaccagcactgctttgaaagctactctgag
agtgattcagaatgtcctacttgcatgcctgaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcatgatcagtttcagcatcagcttaagtgctccaat
gatggtttttccgtcgtcgctgactactttggtcgaggcgtttttaataagctcaccctc
atcacagatttgcctttgggaaagtcagctacgaccattgaggctggcctccagagggag
ctgctgatgcacactaagcgtagtacctga
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