Listeria monocytogenes SLCC2755 (serotype 1/2b): LMOSLCC2755_1029
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Entry
LMOSLCC2755_1029 CDS
T02219
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmw
Listeria monocytogenes SLCC2755 (serotype 1/2b)
Pathway
lmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2755_1029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmw03019
]
LMOSLCC2755_1029
Messenger RNA biogenesis [BR:
lmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMOSLCC2755_1029
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
CBY48621
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All DBs
Position
complement(1055941..1057608)
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AA seq
555 aa
AA seq
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MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIY
EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQQ
VVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGS
QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKV
NNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMANGD
VLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRV
MAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttaaaaataatgagacagctgttttcgcccttggtggactaggcgaaatc
ggtaaaaacacatatggcgtacaatttcaagacgaaattattctaattgatgcaggaatc
aagttcccggaagacgaacttcttggtattgattatgttattcctgactacagttaccta
gttaaaaacaaagataagattaaagggctttttatcacccatggtcatgaagatcatatc
ggtggcgttccttacctacttcgcgatcttaatatcccaatttacgctgggaaacttgcg
agtgcacttatccgcaacaaattagaagaacatggcttgcttcgtcaaaccaaaatttat
gaatatgaagaagatgacgtttttaaattcagaaaaacaagtatctctttcttccgtaca
acccatagtattcctgatacgtatggtattgttgtcaaaactccatctggtaacatcgtt
catactggtgacttcaagtttgattttactccagttggcgaaccagcaaacctaacaaaa
atggctgaaatcggtaaagaaggcgttctttgtttactatctgatagtacaaatgcggaa
gtaccaaatttcaccatgagtgagcgtgtcgttggcgaaagtattaaaaatattttccgc
gatgtagaaggacgaattattttcgctaccttcgcatctaatatttaccgtttacaacaa
gtagttgaatcctctatcgaaactggccgtaaaatcgctgttttcggtcgtagtatggaa
tctgctatggaaatcggtaaacaattaggctatattcaagcgccaaaagatacatttatt
gatgtgcatcaacttaataaaacacccgctggaaatgtgactatcctttgtacagggagt
caaggtgaaccaatggctgctctttctagaattgctaatggtacgcaccgccaaatccaa
attcaaccaggtgacacggtagtcttctcgtcttccccaatccctggtaatacaacgagt
gtaaaccgcacaatcaatttactatatcaagctggtgcagaagttatccatggtaaagta
aataatatccatacttctggtcacggtggtcaacaagaacaaaaactaatgcttcgtttg
atgaaacctaaattctttatgccaattcatggtgaattcagaatgcaaaaaatccatgca
gagtctgctgaagaatgtggtgttccagaagaaaatagctttattatggcaaatggagat
gtactcgcattaacaagtgaaacagctcatgttgctggtaaaatccatgcagcaagcgta
tatattgatggtagcggtattggcgatatcggtaatattgtccttcgcgatcgtcgtatt
ctttctgaagaaggcctcgtaattgttgttgtatccattgatatgaaaaattctcgtgtg
atggcaggacctgatattatttcacgcggcttcatttatatgcgtgaatccggtaatctc
atcggagaagcacaaggcctcctaacgcgacacttaaataaagtaatggaacaaaaaaca
acgcaatggtctgaaatcaaaaatgaaattacagatactttgcaacctttcttgtacgaa
aaaacaaaacgtcgtccaatgattttaccaataatcatggaagtatag
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