Liquorilactobacillus nagelii: BSQ50_01400
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Entry
BSQ50_01400 CDS
T06235
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSQ50_01400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lng03021
]
BSQ50_01400
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_01400
Enzymes [BR:
lng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSQ50_01400
Transcription machinery [BR:
lng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSQ50_01400
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSQ50_01400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUJ31335
UniProt:
A0A3Q8CE80
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All DBs
Position
301833..302777
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIEESPNFGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL
HEFSTIKGVREDVTQIILNLKKVALKIDSEEDQALEIDVTGPLDVTASDIQGSSEVEVLN
KDLYLCSVAEGASLHVRMNANKGRGYVSADENKTKADDMPIGVLPIDSIYTPIERVNYQV
EKTRVGQKNDYDKLTLDVWTNGSISPSEAISLSAKILTEHLTLFVDLTDEAKNAEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEADMMKVRNLGRKSLEEVK
NKLVDLGLSLRHED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaaaccaaaaattcacaaaatagaagaaagtcctaattttggtaaa
tttattgtcgagccattagaacgtggctatggcacaactttgggtaattcgcttcgtcgg
attttgctttcctcattgcctggtgctgcgattactaatattcagattgatggtgtttta
catgaattctctacaatcaagggtgttcgtgaagatgttacgcagattattttgaattta
aaaaaagttgcgttgaaaattgattctgaagaagatcaagcattagagatagatgtaaca
gggccgcttgatgtcactgctagtgatattcaaggaagtagtgaggttgaagttttgaat
aaagacttatatctttgttctgtagccgaaggtgcttcactccatgttagaatgaatgct
aataagggccgcggttatgtttcagctgatgagaataaaacaaaagctgatgatatgccg
attggtgttttaccaatcgactcaatttataccccgatcgaacgtgtcaattatcaagtc
gagaaaacacgtgttggtcaaaaaaatgattatgataaattgacattagatgtttggacg
aatggttcaattagtccgagcgaagctatcagtttatcggcaaaaattttaaccgagcat
ttgaccttatttgttgatttaactgatgaagctaagaatgctgaaatcatggttgaaaaa
gaagaaacacataaagaaaaaatgcttgaaatgacaattgaagaattagatttatctgtt
cgttcttataattgcttgaagcgagcagggattaatactgttcaggaactgactaataag
tcggaagctgatatgatgaaggttcgtaaccttggtcgtaagtcgcttgaagaagttaag
aataaattagtagatttgggtctttcattacgccatgaagattaa
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