Loa loa (eye worm): LOAG_07941
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Entry
LOAG_07941 CDS
T02664
Name
(RefSeq) RING finger protein nhl-1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
loa
Loa loa (eye worm)
Pathway
loa04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
LOAG_07941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_07941
04121 Ubiquitin system [BR:
loa04121
]
LOAG_07941
Enzymes [BR:
loa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOAG_07941
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOAG_07941
Ubiquitin system [BR:
loa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
LOAG_07941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
TolB_like
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
9945366
NCBI-ProteinID:
XP_020302208
LinkDB
All DBs
AA seq
1144 aa
AA seq
DB search
MIIVKYCRQPKLLPCHHTFCLPCLDNCVDLVRRVLKCPECRAEHPVPYEGVKNFQSNYTL
TGFLDIHLQATDDNAAQLEAYIQRYNLERCKICDEKAVLDICAHCEKRACSDCRATHLEM
LKRDLTRMLNQVKRLSNRITEASDGLSKGAELLSLNCETTKDEVREYFRRYYRELKKREE
MFIEEIETFNATETRLMRNLRDILEIESSNMSEGCAYLEAALKGEREMQDSELVKLKSVF
SDGLEYLRNFQPDADELFSKKLRFSPGDDASKLPTAIASFGELTVMLPQFAGRYLPLEQS
YLPRPMKIGYESDNYKYASKRVVDLEEGGGRPQNDFRGTVGRYGIRVNAGEEDMMSIRYR
RRQQMEEEAWNRLRAEKFDNSGQLLGAGSNTGTSGSIGSGICHKPGNSPWSRTVIGNGMS
PSVASTNAITKNDLTTATAKVIPEGLSTTTISDSSRQSGVTTNENNSVNKFLVVPKGVVL
NEGQPATESTVTLVQNQSGSEIRQSNANQTSKIVDGINALPQNSRNTLNHSQRSLEESVG
NAATTALQARKSANQSHIPLPLPINNHQNESIDVTPKSSATLKFTKKPPLPRQVSGDDTS
LNEKIENIRTAHEMRRATRIQNMSPKQLVPLNGTTDNSSNSSNRDTNTSDESECENEPIQ
QKQTNSRFRIICRSASESKEPIVHQRPADPNPLSSAIQETLLSTESAEGSSLPIPVTHYP
GEQLPSWLLRRRQRYQRSKTNPDLISVLVALNGQQSNLANLAFPSADGNSNNISPSTTSQ
IPSSNSRVQQLLLERSSRLAGSGLLVRQDSETSDMAVIATPSLPSQDRRSRYRKRSSIAL
DGETSYDGRLFQAPRFICTVDYVAKAKPKLVFGKKGSKEGELNWPRGLAVLGGNEFAVCD
SSNHRICIFNTGGRLLRMFGKYGSGDAQLDSAAGICCSRYKHLIVSDRYNHRIMIFDQNG
HCVKKFGGHGPSSGRFNNPWGVAVDDMGMIYVVDKDNHRVQMFDSKGQFAGKFGTMGPGI
GQFHHPQFIAVNKRTQNIYVTDSSNHRVCIFDHNGNPIFQFGSEGYQNGQMKFPRGIAVD
DQGFIIVADSGNNRVQIFYPNGRYMHSFGTWGNAPGQLKGVEAVALIDTTIVVSDRENHR
IQLF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgtcaaatattgcagacaaccgaaactgctaccatgtcatcatacattttgt
ttaccgtgtctggataattgcgttgatttggttcgtcgggtgctgaaatgtccggaatgc
agagcggaacatccggtaccatatgaaggtgtcaaaaatttccaatccaattataccctt
acaggtttcttggacatacatttgcaagcaacagacgacaatgccgctcagttggaagct
tacatccagaggtataatctggaacgatgtaaaatttgcgatgaaaaagctgtactggac
atttgcgcccactgtgaaaaacgagcctgcagtgattgtcgtgcaacacatctggaaatg
ttgaagcgtgatctaacgagaatgctcaaccaggtgaaacgtttatcaaatcgaattacg
gaagcatctgatggattgagtaaaggagctgaattgttatcattaaactgtgaaactacg
aaggatgaggtcagagaatattttcgtcgttattatcgggaattaaaaaaacgcgaagaa
atgtttatcgaggaaatcgaaacatttaatgcaaccgaaactcgacttatgcgtaattta
cgggatatacttgaaatcgaaagttcgaatatgagcgaaggctgtgcatatttagaagca
gcactgaaaggtgaacgagaaatgcaagattctgaactggtgaaactaaagagtgtcttt
tcggatggattggaatatttgaggaattttcaacctgatgccgacgaacttttctcgaaa
aagttacgcttttcacctggtgatgatgcctcaaaattaccgacagctattgccagtttt
ggcgaactcaccgtcatgctaccccaatttgctggacgctatcttccgttggaacagtcc
tatttaccacgtccgatgaaaattggttacgaatcggacaactataagtatgccagtaaa
cgggtggttgatttggaagaaggaggtgggcgtccccaaaacgactttcgcggtacggtg
ggtcgttacgggatacgtgttaacgctggagaggaagatatgatgtctattcgatatcgt
cgtcgacaacagatggaagaagaagcctggaatcgattgagagcggaaaaatttgataat
tctggccagttattaggtgctggtagtaatactggcacttcaggaagtatcggtagtggt
atttgtcataagccgggaaatagtccatggagccgtaccgtaattgggaatggtatgagt
ccatctgttgctagtacaaatgctattacaaaaaatgatttaacaaccgcaactgcaaaa
gttatccctgaaggcttatcaactaccactattagcgatagttcgagacagagtggtgtt
acaacaaatgagaacaattcagtaaacaaatttttagtcgttcccaaaggtgtggtgtta
aatgaaggtcaacctgcaacggaatcaactgttacgcttgtccagaaccaatcaggaagt
gaaattaggcaatcgaatgctaaccaaacaagcaagattgtcgatggtatcaatgcttta
ccgcaaaattcgagaaatactttaaaccactcacagcggtcactggaagaatccgttggt
aatgcagcaacaacagcattacaagcccgtaaatctgctaatcaaagtcatataccgcta
cccttaccaataaacaatcatcaaaatgaaagcatcgatgtcaccccaaaatcttcggcg
acactgaaatttaccaagaaaccgcctctgccacgacaagtgtcaggtgatgatacaagt
ttgaatgaaaaaattgaaaacatccgtacagcccatgaaatgcgtcgtgctactcgaatt
caaaatatgtcaccgaagcagttggtacctttgaacggtactactgacaacagcagtaac
agcagcaaccgggacactaatacaagtgatgaaagcgaatgtgagaacgaaccaatccag
cagaaacagaccaacagtcgcttccggatcatttgtcgtagtgcttctgaatctaaagaa
ccgattgtccaccaacgtcctgccgatccaaatcctctttcgtctgcaattcaggaaaca
cttctatcgactgaaagcgctgaaggatcgtcattaccgattccggttacacattatcca
ggtgagcagttgccatcatggttattgagacgtcggcaacgttaccaacgctcgaagaca
aatcctgacctgatttccgtactggttgctttgaacggccaacagagtaacctggcaaac
ctggcattcccctctgctgatggtaatagtaacaatattagtcccagtactactagccag
ataccatcctcaaatagccgggtccaacaactccttttggaacgctccagccgtttggcc
ggtagcggtctattagtgcgccaagatagcgaaaccagcgacatggcggtgatagctact
ccgtctttaccgagtcaagatcgtcgatcacgataccgtaaacgatccagtattgctttg
gatggcgaaacctcctatgatggtcgtctgttccaagctccacgtttcatctgtactgtt
gattacgtggcaaaagcaaaaccaaaactggtgtttggtaaaaaaggttccaaagaagga
gagcttaattggccacgtggtcttgccgtcttaggcggtaacgaatttgcagtatgtgac
agtagcaatcatcgcatctgtatatttaatacaggtggacgtttgttaaggatgtttgga
aaatacggcagcggtgacgcacaattagacagtgctgctggaatttgctgtagtcgctac
aaacatctaattgtttccgatcgttataatcatcgaatcatgatttttgatcaaaatggg
cattgcgtgaaaaaatttggtggacatggcccatcgagcggtcgtttcaacaatccatgg
ggtgtagccgtggatgatatgggaatgatctacgttgtggacaaggacaatcatcgtgtc
caaatgttcgatagcaagggacaatttgctggcaaatttggtacaatgggcccaggaatt
ggccaatttcatcatccacaattcattgctgttaataagcggacacaaaatatttatgta
acagacagttcgaatcatcgagtttgcatctttgatcacaatggcaatccaatctttcaa
tttggttccgaaggataccaaaacggccagatgaaattcccacgtggaatcgccgttgat
gatcagggtttcattatcgtagctgacagtggtaacaatcgtgtacaaattttctatccg
aatggtcgttacatgcatagttttggtacatggggtaatgcacctggacaacttaaaggt
gttgaagcggttgcactcattgataccacaattgttgtttccgatcgtgaaaatcatcgt
atacaattgttctaa
DBGET
integrated database retrieval system
