Lepisosteus oculatus (spotted gar): 102688920
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Entry
102688920 CDS
T07349
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X5
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loc03016
]
102688920 (tsen54)
Transfer RNA biogenesis [BR:
loc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102688920 (tsen54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
102688920
NCBI-ProteinID:
XP_006635389
Ensembl:
ENSLOCG00000011191
UniProt:
W5MZE2
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Position
LG10:complement(30136432..30150351)
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AA seq
532 aa
AA seq
DB search
MADLESEGVSKKAVFCSELLCPTELFSARSRSHKIPARGQKDFLPDASEKQKERLRRSLD
EHWALIEEERVERLGSLVKAEWIPTGNVVELKSPAGKFWQTMGFSEQGKQFLLPEEALHL
LECGNVQVFYRDLPLSVQEGYEMFLSSDTITLQQYQVFSHLKRLGYIVNRFDPSSVPSPY
ERQLNLSFQREKPARQHLKRKRSHGASSRIGDGQEEQQEKQKKEDSVFDRKNGQDPGRTV
LGSEEKLMPDPPAPAVEIQMEAESVSAAPQRSWWVSHPDEPPCPPEGTEDRLGSSSHLPR
PKWDFSKISFPDLGSSGWLPSLPAPNPALLPPGLSAGTCDITPWLGRLNLKPERLSQRER
EQERVRCHRRGVNEDREVQRCSSWKEYRELLERRRQGRTKGRPAHLWEEAVRPLTAPGDA
SCTGDLLERIGIIKPSRLCDGASNLSDKSDQWKIAFDVYQPGTVAEFKKTNPGKPYSRMC
VCSFDGPVPDLQVLKRLAHESGDIPVMFAVVDSGDISFFTFKDFQLPTDVWH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctagaaagcgaaggagtgagtaagaaagccgttttctgcagcgaattgctc
tgtcccacggagctcttttctgctcggtcccggagccacaagattccggcacggggccag
aaggattttctccctgacgcctccgagaagcagaaggaacggctgcggaggagcctggat
gaacactgggctctgatcgaagaggagcgcgtagaacgattaggaagcctggtgaaagca
gaatggattcccacaggcaatgttgtggagcttaaatctccagcagggaaattttggcag
accatggggttctctgagcaagggaagcagtttctcctgccggaagaggctctgcatctt
ctggagtgtgggaatgtgcaggtgttctacagagatttacccctgtcggttcaggaaggt
tatgagatgtttctttctagtgacaccataaccttgcagcagtaccaggtcttcagccat
ttgaagagactgggatacattgttaatagatttgacccaagtagtgttccttcaccgtat
gagagacagctgaacctgtccttccagcgagagaagcctgccagacagcacctgaagcga
aagcgcagccatggggccagctctaggattggagatgggcaagaagaacaacaagagaag
cagaagaaggaagattcagtatttgacaggaagaacggtcaggacccggggaggactgtg
ttgggctcagaggagaagttgatgccggaccccccagcgcctgctgtggaaatccaaatg
gaagctgaatctgtctctgctgccccacagagaagctggtgggttagtcacccagatgag
cctccgtgtccaccggagggcacagaagacaggttggggagctcctcacatctacccagg
ccaaaatgggacttcagtaagatttccttccctgatttggggtcatctggatggctcccc
agcctccctgccccgaatccggctctgctgcccccgggcctgtcggcggggacttgtgac
atcaccccgtggctgggaaggctgaacctaaagcccgagcggctctcccagcgggagagg
gagcaggagagggtgaggtgccacagacgaggggtgaacgaggacagggaggtccagcgc
tgcagcagctggaaggagtacagggagctgctggagaggaggaggcaggggaggacgaag
ggcaggccggcacatctgtgggaagaagcggtcaggcctctcactgcgccgggggacgcc
tcctgcacaggtgacctgctagagagaatcggtattatcaagccttcacgcttgtgtgat
ggagcatcaaacctctcagacaagtcagatcaatggaaaattgcctttgatgtctaccag
cctggtacagttgcggagtttaagaagacgaatcccgggaaaccttattctcgcatgtgt
gtctgcagctttgatgggccagtcccagacctgcaggtgctgaaacgactggcccatgag
agtggagatatccccgtgatgtttgcagtggtggacagcggagacatttccttcttcacc
tttaaggactttcagctgcccactgatgtctggcattga
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