Lepisosteus oculatus (spotted gar): 102696979
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Entry
102696979 CDS
T07349
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102696979 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102696979 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102696979 (itgb4)
04810 Regulation of actin cytoskeleton
102696979 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102696979 (itgb4)
04515 Cell adhesion molecules [BR:
loc04515
]
102696979 (itgb4)
04090 CD molecules [BR:
loc04090
]
102696979 (itgb4)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102696979 (itgb4)
Exosomal proteins of bladder cancer cells
102696979 (itgb4)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin beta subunits
102696979 (itgb4)
CD molecules [BR:
loc04090
]
Proteins
102696979 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Integrin_B_tail
Calx-beta
Pur_ac_phosph_N
PSI_integrin
EGF_2
I-EGF_1
SEA
Motif
Other DBs
NCBI-GeneID:
102696979
NCBI-ProteinID:
XP_015212018
Ensembl:
ENSLOCG00000011516
UniProt:
W5N0M1
LinkDB
All DBs
Position
LG10:31051930..31100013
Genome browser
AA seq
1932 aa
AA seq
DB search
MERWVLHLSVGMVLLALLWTTTHASRVNHCLAARATTCTQCIQSGKDCSYCADEEFKQPR
CDLYNNLDAARCQMIMRAESEISVQRNMKIQTSLKQSQVAPQLMSMRLQPGEEQEVELHV
FEPLQAPLDLYILMDFSNSMSDDLDNLKKMGDSLANVVRNLSEDFTIGFGKFVDKVTEPQ
TDMRPQKLKEPWPNSDPPFSFKNVIRLTGSSETFRKELQKERISGNLDAPEGGFDAILQT
AVCKNQIGWRDNSTHLLVFSTESAFHYEADGGNVLAGILPRNDEACHLDRFGSYTHDTLQ
DYPSVPTLVRLLGKHNIIPIFAVTNYSYSYYDKLHRYFPVSEIGELKEDSSNILDLLRNA
FQNIRSKISIRAEDVPRALSTEILSQKAQITETGTFRITPGEEGIFKVRVKAQKEVEGTH
VCQLSQQEREGSLRVKPTTFNTALNINAGIVCKKCNCEETPIKKAVRCNRNGDLVCGVCT
CNPGWKGPYCNCSESSTSDASSCINPKTNRTCSDRGTCVCGVCICFNSEKNPLETYEGNF
CEFDSSQCPRFGGFLCNGLGRCFMGQCACDEGWEGSACECPKSNETCIDSKGGICNGRGT
CQCGRCICDDPETFPGATCEANFQARLGLCENKRSCVQCQAWKTGELKGKKCEGCPFKIT
MVDELKKKEEVIETCSFRDEDDDCTYEYTVDYLPNSKNLSDVQVLKKKECPPGGFLWLIP
LIMFLMLLLGLLLLCCWKYCACCKACLAMLPCCGRGRMVGFKEDQYMLRQSLLTSDHLDT
PLVRTGPPKSTDVVRWKIMDNVHRSATALTQTLNSKETIQYPLSLRLTRLFTDSLSRPDA
RETDLLRREVEENLNDVYKQIPGVQRVQKTKFRLQPNAGKRQDHTVVDTVLSAPRSAQPE
IVRLTERQVQSGRFSDLKVVPNYYTVASDRDATGLVELQEGVESVDVRVPLFVKDEDDDK
KQLRVEALEVPLGIAEIGRRFVNITIIKEQAKSIFTFLQPSYTYSRQDKVANIPVSREII
EDGHTQVTYRTRDLTAKDQRDYVFTEGELTYRPGETQKTVPVKLLELTEADSLLGEKQIK
QFVMDLSNPRQGAKLGRYPRTTVTISDDPEPSVMMFKKSTQGFTTADQLYTIPVIRTRNQ
EGPATVYWRTRKASRFEMSSPLKFSPGETEKNIVIDPCMHPGPIKPEIFQLELFDPSANA
VIGERKTTLVSVVEPSDGRPNEVQLFSQNLQSPGGRLGAPTKVTAKATSAKSIHLNWTPP
PGKPSGYKVKYWIEGDPESDAQVIDCKSPQADLTGLYPYCDYEMRVCSYNALGEGRYSDV
VQCQTLEDVPSEPGRLAFNVINPTVTQLSWAEPAETNGDITAYEVTYTPINEDSKPMGPT
KKVKIDSPKKRMLLIENLQKCQTYCYTVKARNKAGWGPTREATINLATQPPRPLSIPIIP
DIPIVDAEAGEGYDSYLMYSSDVMRSPGGSKRPSVSDEEFVNGKWDQSFLYPGGAGSLTR
NISTTSYNQSSLSPSFRSPGGTMTMETTTTYLPGQGGSLTRRHDGMVHGGLRTEEVVLRK
RSETKGYYDNDGVRDSIVMVDEPGGFSDSLGISGYSKKVVNYNISHSMRGRTQSEDVNDV
LQNLDMVLQDSRLPPGVPDTPTRLVFSALGPTALKVSWQEPHCEKEVLGYCVLYQLLNGG
DVKRIDVPNPAENSVVVKDLLPNHSYIFKVKAHSEEGWGPEREGVITIESAVDPKSPLSP
VPGSPFTLSTPSAPGPLVFTALSPESLQLSWEKPRKPNGSILGYMVTCEQLNGGGDVRTF
QVNGDTAETSLTVPNLSENVPYKFKVQARTTQGFGPEREGIITIESQDGGNFSQFNSQQV
MRRDVFNMPGEVTTRTTHTMLNDPYFSDGMMMTTQRMETSGTVTRQMTKEVVSRSMVSGT
SMTKRVENFYEA
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggagagatgggttctgcatctctctgtggggatggtcctcctcgcactgctctggacc
accactcacgccagcagagtcaatcactgcctggcagctcgggccaccacctgcactcag
tgtatccagtctgggaaggactgctcttactgtgctgatgaggaatttaaacagccaaga
tgtgatctttacaataacctggatgcagcaagatgccagatgattatgagagctgagagt
gagatatccgtccagagaaacatgaagatccagaccagtctgaagcagtcccaggtggcc
ccccagctcatgtcaatgcggctgcaacctggcgaggagcaggaggtggagctgcacgtc
ttcgagcccctgcaggcccccctggacctctacatcctcatggacttctccaactccatg
tcggatgatctggacaacctgaagaaaatgggagacagcctggctaacgtggtgaggaac
ttgtctgaagactttaccattggctttgggaagtttgtagacaaagtcacagagccccag
actgacatgagaccccaaaaactgaaggaaccttggccgaacagcgaccctcccttctct
ttcaagaatgtcattcgcctgacgggttcttccgaaacgttcaggaaagagctgcagaag
gagcgcatctctggcaatctggatgctccagagggtggctttgatgccattctgcaaact
gctgtctgcaagaaccagattggctggcgtgacaacagtacccacttgctggtcttctcc
actgagtcagccttccactacgaggcggatggtggcaatgtcttggctggcatccttccg
cggaatgatgaggcctgccaccttgatcgctttggctcctacacccacgacaccctgcag
gactacccttctgtgcccacgctggtgcgcctgctgggaaagcacaacatcatccccatc
ttcgctgtcaccaactactcatactcctactatgataagttacatcgctactttcctgtg
tcagaaattggggagctcaaggaggattccagtaatatccttgatctgttacggaatgcc
tttcagaatattcgttccaagatcagcatccgagcagaagatgtgcctagagccttgagc
acagaaatcctgtcccagaaggctcaaatcacagaaactggcaccttcaggatcacaccc
ggggaagagggcatcttcaaggtccgtgtgaaggcacagaaggaggtggagggcacccac
gtgtgtcagctttcccagcaagagagggagggcagcctgcgtgtcaaacccaccaccttc
aacactgctctcaacatcaatgcaggcatcgtgtgcaagaaatgcaactgtgaagagact
cctataaaaaaagcagtgcggtgcaacaggaatggggatctggtgtgtggagtgtgcaca
tgtaacccgggctggaagggcccgtactgtaactgctctgagagcagcacctcagacgcc
agcagctgcatcaatcccaagaccaacaggacgtgttctgaccgtgggacatgtgtgtgc
ggtgtctgcatatgcttcaactctgagaaaaaccccctggagacctacgagggcaacttc
tgcgagtttgacagctcccagtgcccacggtttggagggttcctctgcaacggccttgga
cgctgtttcatgggtcagtgtgcctgtgatgagggctgggaaggctcggcctgcgagtgt
cccaagagcaatgaaacctgcatcgacagcaaaggagggatctgtaatggcagaggaacg
tgtcagtgtggccgctgcatatgtgacgatccagagacattccctggtgctacatgtgag
gccaactttcaggcgcgccttgggctgtgtgagaacaagcggagctgcgtccagtgccag
gcctggaaaaccggcgagctgaagggaaagaagtgcgaaggctgtcccttcaagatcacc
atggtggacgagctgaagaaaaaagaggaagtgattgagacctgcagtttccgggatgag
gatgatgactgtacctatgaatacactgtggactatctccccaactcaaaaaacctcagc
gatgtccaggtgctgaagaaaaaagagtgtccccctggaggcttcctctggctcatcccc
ctcatcatgttcctcatgctgctcctgggtctgctgctcctctgctgctggaagtactgt
gcctgctgcaaggcatgcctggctatgcttccatgctgtgggcgaggacgcatggtgggc
ttcaaagaagaccaatacatgttgcgacagagtctcctaacctctgaccacctggacacc
ccactggtgcggactggaccccccaagagcactgatgtggtgcgctggaaaatcatggat
aatgtgcaccgcagtgccactgcgctcacacagaccctcaactccaaagagaccatccag
tatcctctgtccctgcgcctgactcgtctcttcacagacagcctgtctaggcctgacgcc
agagagacggacctgttgcgtagggaggtggaggagaatcttaatgatgtctacaagcag
attcctggagtacagagggtccaaaagacaaaattcagactccaaccaaatgctggtaaa
aggcaggaccacactgttgtggatacagtgctttctgcaccacggtctgcccagcctgaa
atcgtcaggctcacggagagacaggtgcagtctggcaggttcagcgacttgaaggtggtg
cccaattactacaccgtggcttcggacagagacgcaacaggattggtggaactgcaggaa
ggggtggagtcagtggatgtgcgtgtgccgctctttgtcaaggatgaggacgatgacaag
aaacagctgagggtggaggcgctagaggtgccattgggaattgctgagattggacgccga
tttgtcaacatcaccatcatcaaggaacaggccaagagcatcttcaccttcctgcagcca
tcctacacctacagtcgtcaggacaaggtggccaacatccctgtgagccgtgagatcatt
gaggacgggcacacccaggtcacctaccgcacccgggacctcaccgccaaggaccagcgg
gattatgtattcacggaaggcgagctgacctaccggcctggagagactcaaaagactgtg
ccagtgaagctgctggagctgacagaggcagactccctcctgggcgagaagcagatcaag
cagtttgtcatggacctcagcaacccccggcagggcgccaaactgggacgctacccacgt
accactgtcactatctccgatgatcccgagcccagtgtgatgatgttcaagaagagcacc
cagggcttcacgacagctgaccaactctacactatccctgtgattcgaacccgcaaccaa
gagggccctgccacggtgtactggcggacccgcaaggcttcacgctttgaaatgtccagc
cccttaaagtttagccctggagaaacagagaagaacattgtgattgacccgtgtatgcac
cccgggcccattaaacccgagatcttccagctagagctgtttgaccccagcgccaatgcg
gtcatcggggagaggaagaccactcttgtgtccgtcgtggagccgagtgatggtaggccc
aatgaggttcagcttttctctcagaatctccagtctccaggaggacgccttggtgccccc
accaaagttactgccaaggccactagtgccaagagtatccatctgaactggacccctcct
cctggcaaacccagcggctacaaggtgaagtactggatcgagggtgacccagagtctgat
gcccaggtcattgattgcaagagcccgcaggcagatctgaccggcctgtacccctactgc
gactatgagatgcgagtgtgtagctacaacgctctgggcgaggggcgttactctgatgtg
gtgcagtgccagacactggaggacgtgccgagtgagccaggtcgcctggccttcaatgtc
atcaacccgactgtcacccagctcagctgggcagagcctgctgagaccaatggtgacatc
actgcctatgaggtcacctacacgcccatcaacgaggacagcaagcccatgggccccaca
aagaaggtgaagatcgacagccccaagaagcgcatgttacttatcgagaacctgcagaag
tgccagacctactgctacactgtcaaggcccgcaacaaggctggctggggccccaccagg
gaggccaccattaacctggccacgcagccccccagacccctgtccatcccaatcatccca
gacatcccaattgtcgacgctgaagcgggtgaaggttatgacagctatctgatgtacagc
tctgacgtcatgcgctctcccgggggaagcaagcgccccagcgtgtccgacgaagagttt
gtcaatgggaagtgggatcagagcttcctctatcctggaggagcgggctctctgacacgc
aacatcagcaccaccagctacaatcagagctccctgagccccagtttccgcagtccgggc
ggcactatgaccatggagaccacaaccacctacctgcccggtcaagggggttcgctcacg
cgcagacatgacgggatggtccatggagggctccgcacagaggaggtggtcctcaggaag
cggtccgagacgaagggttactatgacaacgatggtgtgcgagactctattgtcatggtg
gatgagcctggcggattctcagacagtctaggcatttctgggtacagcaagaaggtggtg
aactacaacatctctcacagcatgagaggtcggactcagtctgaagatgtcaatgatgtc
ctgcagaatctggacatggtgctgcaagactctaggctgccccctggtgttcctgacacg
cccacacgcctggtgttctcagctctgggccccactgccctgaaggtgagctggcaggag
ccgcattgcgaaaaggaagtgctgggctactgcgtgctgtaccagctgcttaatggaggt
gacgtgaagaggatcgacgtgcctaacccggcagagaactcagtggtggtgaaagacttg
ctgcccaaccactcatacatcttcaaagtgaaggcccatagtgaggagggctggggaccc
gagagggagggtgtcatcaccattgagtctgcggtcgaccccaagagtccattaagtcct
gtaccaggctcccccttcacgttaagcaccccaagtgccccaggccccctggttttcaca
gcactcagccccgagtctctgcagctgagctgggagaagccacgcaagcccaatggaagc
atccttggctacatggtgacctgcgaacaactgaatggagggggagacgttcggactttc
caggtgaacggtgacactgctgagaccagtctgacggtgcccaacctcagtgagaacgtg
ccctacaagttcaaagtgcaggccaggaccacgcagggctttggtcctgaaagagagggc
atcatcaccatcgaatcgcaggatggaggtaacttctctcagttcaacagccagcaggta
atgaggagagatgtcttcaacatgcctggggaagtcaccaccaggaccacccacacaatg
ctcaatgacccctacttctcagacggcatgatgatgaccacgcagcgcatggagaccagt
ggcacagtgaccagacagatgaccaaagaggtggtgagcaggagcatggtctctgggaca
agcatgaccaagagagtggagaacttctatgaggcttga
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integrated database retrieval system
