Lepisosteus oculatus (spotted gar): 102698120
Help
Entry
102698120 CDS
T07349
Symbol
col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102698120
NCBI-ProteinID:
XP_006626241
Ensembl:
ENSLOCG00000016970
UniProt:
W5NK19
LinkDB
All DBs
Position
LG1:54886263..54897878
Genome browser
AA seq
658 aa
AA seq
DB search
MELQITSLLLVLLCLSEVHAGAYYGKKSETKGPQYQPYNVKSQVLPMRGEQGEPGIPGEP
GQPGPPGPPGPPGKGGYGMPGPQGPPGPPGPQGYSSPGKPGMPGSPGKPGERGSPGEKGD
PGSSGPQGPRGMPGSPGIPGPAGISAPGKPGPHGPAGSPGPRGEPGMKGHPGAPGQPGQK
GEKGYGIQGHPGERGAPGPAGPAGLPGQPGVGKPGKPGYPGEPGKQGMPGQDGLPGPMGM
PGHKGPAGPPGPSGIGKPGENGAPGLPGQAGPKGPPGPPGATGAPGIPGYGKSGVPGQKG
ERGMNGVPGLPGGKGEQGPAGRAGEPGPSGPAGPSGPSGQRGFPGEAGLPGPKGDAGAVG
PMGPKGLKGDQGPQGFEGKSGYPGSPGPAGARGSPGAPGLKGEAGQAGPAGLPGQPGNMG
PRGSPGRPGEPGARGDDGTPGATGPSGPPGTPGTPGIKGHPGPPGQPGPAGITAKGVPGP
SGPPGLPGPRGSDGLPGHPGSPGPPGPPGEIVYQKNFKAAQAIVQKAPVSAFTALLTKAY
PESGQPIQFDNTLYNEQQHYDPSTGIFTCHTPGVYYFAYHVHVKGSNVWVALYKNGSPVM
YTYDEYKKGFLDQASGSAVLYLNEQDQVYVQIPNDESTGVYATDYIHCSFSGFLIGST
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcaaataacaagccttcttctggtactcctctgcttgagtgaggttcatgca
ggggcatattacggcaaaaagtcagagaccaaggggcctcaatatcaaccatataatgtc
aagagccaagtgctgccgatgaggggagaacaaggagaaccaggaattcccggtgaacca
ggacagccggggccacctgggcccccagggcccccaggaaagggaggctatgggatgcca
ggaccacagggaccacctgggccaccaggaccacagggatattcctcccctggcaagcca
ggcatgcccgggtctccgggaaaacctggtgagaggggaagtcctggggagaagggtgat
ccagggtcttctgggcctcaaggtccaagggggatgccaggatctccaggaatcccagga
cctgctggtatctctgctcctggaaagccagggccacacgggccagctggttctccaggg
cctagaggggagccagggatgaaggggcatccaggagctcctggacaaccaggtcaaaaa
ggagagaagggatatggaatccagggccatccaggagagagaggtgctcctggaccagca
ggtcctgcaggactaccgggacaacctggagtaggtaaacctggcaaacccggttaccca
ggggagcccgggaagcagggaatgccaggtcaggatggacttccaggacctatgggcatg
cctggccataaaggcccagctggaccaccaggtccttcaggtataggaaagccaggagaa
aacggtgcaccaggtcttcctggacaagctggaccaaaaggccccccaggacctcctgga
gctactggggcaccaggaatcccaggttatggaaagtcaggggttcctggacagaaaggg
gaaagaggaatgaacggcgtcccaggtctaccaggtggcaaaggagaacaaggcccagcg
ggacgtgcaggagagccgggaccttctgggccagcaggcccctcaggtccttcaggacaa
aggggatttccaggtgaagccggactgccaggccctaaaggtgatgctggtgcagttgga
cccatgggaccaaaaggactgaaaggagatcagggtccacagggctttgagggcaaatcg
gggtacccagggtcaccaggccctgcaggtgcaaggggcagtccaggggctccggggctg
aaaggtgaggcaggacaagctggccctgcaggtctcccagggcaacctggaaatatggga
cctaggggttcccccggccgcccaggcgaaccaggggccaggggagacgatggcacgcca
ggcgcgacagggcccagcgggcctccaggaactccgggtacacctggaataaagggacat
cccggtcctcctgggcaacctggccctgcaggcatcacagccaagggcgtacctggcccc
tcaggcccccctgggctccctggtcccagaggatccgacggcctgcctgggcaccccggc
tcaccaggcccacctggcccccccggagagatcgtctaccagaaaaactttaaagcggcc
caggccatagtccaaaaggcccctgtgtcggctttcaccgctttgttaacgaaggcgtat
ccagagtcgggacagcccatccagttcgacaacaccctctacaatgagcagcagcactat
gacccctccaccggcatcttcacctgccacactccaggagtctactacttcgcctaccac
gtgcatgttaaagggtctaacgtgtgggtcgccctatataaaaacggttccccagtgatg
tacacatatgacgaatacaagaaaggctttctggatcaggcatctgggagtgctgtcctc
tacctaaacgagcaagatcaggtctacgttcaaatacccaatgacgaatccactggtgtt
tatgccactgactacatccactgctcattctctggattcctgattggctcgacgtga
DBGET
integrated database retrieval system