Lysinibacillus pakistanensis: GDS87_00345
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Entry
GDS87_00345 CDS
T06280
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GDS87_00345 (rnmV)
Enzymes [BR:
lpak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
GDS87_00345 (rnmV)
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Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
DUF3226
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QGG49498
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All DBs
Position
72805..73371
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AA seq
188 aa
AA seq
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MQIKEIIVVEGKDDTTAIKRAVHADTIETNGSAISEETLKRIQHAQDKRGVIVFTDPDYP
GRRIRAIIEERVKGVKHAFLPKAKTIAKNGKGLGIEHAADEDIRKALQQVYTPSSIEPIT
DDITLEDLMTARLIGHPRAKYRRDRLGELLNIGATNGKQLHKRLKMFQITEQQFGAAVAQ
LDQEENNA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaataaaagaaatcattgtggttgaaggaaaagatgatacaactgccattaaaaga
gctgtacatgcagatactatagaaacaaatggatcagcaatttcagaagaaacgctgaag
cgaattcagcatgctcaggataaaagaggtgtcatcgtttttactgatcctgattatccg
ggacgtcgaattcgtgcaattatagaagagcgtgtgaaaggggttaagcatgccttctta
ccaaaagcaaaaacaattgccaaaaacggtaaagggcttggaattgagcacgcagcagat
gaagatatacgaaaggcgctccaacaggtctatacgccaagtagtatagagccgataact
gatgatattacattagaggatttaatgacagcacgtttaattggacatcctcgtgcaaaa
tatcgtcgggatcgtcttggggagctattgaatattggcgcaacaaatggtaagcagctt
cacaaaagattaaaaatgtttcaaattacagaacagcaatttggtgcggctgtcgcacag
ctagatcaggaggaaaacaatgcataa
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