Lysinibacillus pakistanensis: GDS87_07075
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Entry
GDS87_07075 CDS
T06280
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lpak03012
]
GDS87_07075 (abc-f)
Translation factors [BR:
lpak03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
GDS87_07075 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
Dynamin_N
AAA_23
AAA_16
FtsK_SpoIIIE
nSTAND3
DUF87
AAA_22
T2SSE
TMF_DNA_bd
AAA_15
AAA_28
AAA_18
NB-ARC
MobB
Pox_A32
NACHT
ATP-synt_ab
DUF3584
DO-GTPase2
Vit_open_b-sht
MMR_HSR1
Zeta_toxin
DLIC
Spc29
SRP54
Motif
Other DBs
NCBI-ProteinID:
QGG50729
LinkDB
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Position
1538421..1540220
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AA seq
599 aa
AA seq
DB search
MQIKAEQIQKIIGGNVLFEELQLEVNTGEHVAIVGVNGSGKTTLLQLLSGLDTPDKGRII
KSKEATIGYLHQIPQYPMLSVKQVLEEAFTEIYALKAKMTKLEQEMQEAVSDKVLEQYGH
VQELFMLQGGYEIDAQLAMIANGLGITPLLEQPFTSLSGGEKTKVMLGQILLSNPSILLL
DEPTNHLDMQAIEWLENYVRNFAGIVIVVSHDRHFMNQMAQKIIEIEDGEAFTYIGNYDA
FVKQKEAKVEQQFAEFEEQQKKIKKMQETIKRLKQWANEANPPNASMHRRAKSMEKALAR
IDRVKKPSTKKKMNLALTMAERSGKEVVQMKAISHAFDKPLLKECDLSVYFGERLAIVGG
NGSGKSTLLKMILGEVIPNEGICRVGSSVKIGYLSQQFEHEHPSIRLIDAFRESVSVSEA
EARHLLAQFLFYGYDVFKKVKDLSGGEKMRLRLAQLMHEDINLLILDEPTNHLDIEAREV
LEDTLESFEGTIIGVSHDRYFLQKIFTKVAWIRHETIQVFEGDYEWARKKHAELVEVPVI
KEITEKTMSAKKELPIEQQIEKLELKLKEPTLAKEQRQKLEQQLEVLFERWIEEGEEHV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagctgaacaaatacaaaaaattattggtgggaacgtattatttgaagaa
cttcaattagaagtgaacactggagagcatgttgctattgttggcgtgaacggaagcggg
aaaacgactttattacagctattatctggtttagatacaccagataagggacggattata
aaaagtaaggaagcgaccattggctatcttcatcaaattccgcaatatcctatgctatct
gtaaagcaagtgctagaggaggcatttactgaaatttatgcattgaaggcaaagatgaca
aagctagagcaggaaatgcaggaagctgtatctgataaggttcttgagcaatatggtcat
gtgcaggaactatttatgctgcagggaggctacgagattgatgcacaattggcgatgatt
gctaatggccttggaattacaccattacttgagcaaccttttactagcctaagcggtgga
gagaaaacaaaggtgatgctagggcaaatccttttaagtaatccttctattttgctatta
gatgaaccaaccaaccatttagatatgcaggcaattgaatggctggaaaattatgtgagg
aacttcgcagggatagtaattgttgtatcccatgatcgccattttatgaatcaaatggct
caaaagattatagaaattgaagatggcgaggcatttacgtatattggcaattacgatgca
tttgttaaacaaaaagaagcgaaggttgaacagcaatttgctgaatttgaggaacagcaa
aagaaaataaaaaaaatgcaggaaaccatcaagcgtttaaagcaatgggcaaatgaagcg
aatccaccgaacgcctccatgcatcgacgtgctaaaagtatggaaaaagcattagctcga
atcgatcgggtcaagaagccgtcaacgaagaagaaaatgaatttagccctgacaatggct
gagcgtagtggtaaagaggttgtgcaaatgaaggcaattagccatgcatttgataagccg
ctattaaaggaatgcgatttgtctgtctactttggagaacgactggcgattgtaggtggt
aatggcagtggtaagtcaacattattaaaaatgatacttggtgaggtcataccaaacgaa
ggcatttgtcgtgttggtagcagtgtgaaaattggctacctttcgcagcagtttgagcat
gagcatccatcgattcgtttaattgatgcctttcgagaaagtgtctcagtatcagaggcg
gaggcacgtcatttactggctcaatttttattttatggctatgacgtttttaagaaggtg
aaggatctaagtggtggcgaaaagatgcgcttacgtctagcccagttaatgcatgaggat
atcaatttattgatactcgatgagccgaccaaccatttagatattgaggcaagagaggta
ttggaggacactttggaatcctttgagggaactattattggcgtgtctcatgaccgctat
ttccttcaaaagatttttacaaaagtcgcatggatcaggcatgaaaccattcaagtattt
gagggtgactatgagtgggcaaggaaaaaacatgctgaactagtagaagtacctgttatc
aaagaaataacagaaaagaccatgagtgctaagaaagagctacctattgagcaacaaatt
gaaaagcttgaactaaaattaaaggaaccaacacttgctaaggagcaacgtcaaaagctt
gaacagcagttagaggttttatttgaaagatggattgaggaaggagaagaacatgtatag
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