Lysinibacillus pakistanensis: GDS87_17670
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Entry
GDS87_17670 CDS
T06280
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GDS87_17670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_17670
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GDS87_17670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DivIVA
LXG
MutS_III
Gp-FAR-1
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
QGG52647
LinkDB
All DBs
Position
complement(3674807..3677173)
Genome browser
AA seq
788 aa
AA seq
DB search
MIAERALKTLEYDKVRQQVATYCTSSIGKTAIDELVPQTDYEKVVQLLEEMDEGLSILRV
KSNVPMGGIFDVRPAARRAQIGGMLSAMELMEVSSTIRASRILRNFIEDIESEAVIEIPH
FITKKEAMPVLTGLQHEINNCIDDNGSVLDSASQTLRSIRQSLRAEEAKVRSKLESLIRG
SNAAKMLSDALVTIRNDRFVIPVKQEYRHHYGGIVHDQSSSGQTLFIEPDSVVQANNEIH
RLKMKEQAEIERILLALSAMVEEVAPDLFNLVKVLGEIDVILAKGKYGQANKCTMPKMNN
DGYIRLVRARHPLLPIDTAVANDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAG
LPVPALDGSELAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELG
AGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIETLSPT
YRLLIGVPGRSNAFEISSRLGLPESIIDRAKGFTGTDRHEVESMIASLEETRRQSEDDAE
RSHELLMESEALRKDLQDKLQAYEERKEALDKKAKEKARKIIDEAKREAESIIAELREMR
KNADQVVKEHELIEARKRLEDATPLDNNKVLKKAAQVKARAQNLVVGDEVKVLSYGQRGT
LLEKVSDSEWIVQMGILKMKISDSDLEYIKPEKEPVQRIAGVKNRNSHVKLELDLRGERF
EDAILRTEKYIDDALLANYGRVSIIHGVGTGALRQGIQNYLKKHKRVKSFRFGEAGEGGF
GVTVVELK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcagaacgcgcattgaaaacactagaatatgataaagtacgtcagcaagtggct
acatactgtacttcatctattggcaaaacggctattgatgagcttgtaccacagacagac
tatgagaaagttgtacaattattagaggaaatggatgaaggactttccattttacgtgta
aaaagcaatgtaccgatgggtggaatttttgatgtacgccctgccgcaagacgtgcacaa
atcggtggtatgctttcagcgatggaattgatggaagtttcaagtacaattcgtgctagc
agaattcttcgcaatttcattgaggatattgaatcagaagcagtgattgagattcctcat
ttcatcactaaaaaggaggcaatgcctgttttaactggcttgcagcacgaaattaacaat
tgtattgatgacaatggttcagtgttagattcagcaagtcaaactttacgttccattcgc
caatctttgcgtgcagaggaggctaaggttcgttcaaagcttgaaagccttatacgtggc
agtaatgctgcaaaaatgctgtcagatgcacttgtaacgattcggaatgatcgcttcgtt
attcctgttaaacaggagtatcgtcatcattatggtggaattgtgcatgatcaatcatct
tctggtcaaacattatttatcgagccagattcggttgtacaagcaaataatgagattcat
cgactaaaaatgaaggagcaagctgaaattgaacgcattttacttgctttaagtgctatg
gtagaggaagtagcccctgatttatttaatttagtgaaagtacttggtgagatagacgtt
attttagcaaaggggaaatatgggcaagcaaacaaatgtacaatgccaaaaatgaataac
gacggttatattcgcctagtacgagcacgtcatccacttttaccgattgacactgcagtt
gccaatgatattgaattcggcaaagacattacggcaattgttattacaggaccaaacact
ggtgggaaaactgtaacgttaaaaacagttggattatgtacattgatggcacaggctgga
ttacctgtacctgctctcgacggttcagaattagcagttttcaagcagttatttgcagat
attggtgatgaacagtctattgagcaatcactatcaacgttctcctcacatatggttaat
attgtagacattttacaaaagtttgatcatgagtcactagtgctcttcgatgaactaggt
gctgggacagatccacaggagggggcagctcttgctatttctattttagatgaagtacat
ggaagaggagctcgtgtgatggcaacgactcactatccagaattaaaagcttatgggtat
aatcgtcctggcgttgcgaatgcaagtgtggagtttgatattgaaactttgagtccaact
taccgtctacttattggtgttccaggtcgctccaatgcatttgaaatttcaagccgtctt
ggcctaccagaatccattatagatagagcgaaaggctttacaggcacagatcgtcatgaa
gtggagtcaatgattgcttcacttgaggagacacgacgccaatccgaggatgatgcagag
cgatctcatgaattgctgatggaatccgaagccttacgcaaagacctgcaggataaacta
caggcttatgaggagcgtaaagaggcactcgataaaaaagcgaaggaaaaggctcgtaaa
attatcgatgaggcgaagagagaagctgaatcaatcatagctgaattgcgtgaaatgcgt
aaaaatgcggaccaggtcgtgaaggagcatgagcttattgaagctcgtaaacgcttagaa
gatgcgacgcctctagataacaataaggtgctaaagaaagcagctcaagtcaaggctcgc
gctcaaaacctagttgtcggagatgaggtaaaggtgttaagctatggtcaacggggtact
ttgctggaaaaagtgtctgattctgaatggattgtgcaaatgggcattttgaaaatgaaa
atttcggatagtgaccttgaatacatcaagccggaaaaagagcctgtgcaacgtattgca
ggtgttaaaaaccgaaatagccatgtgaaattagaattagatctacgtggtgaacgtttc
gaggatgctattttacgtacagaaaaatatattgatgatgctctactagctaattatggg
cgtgtttcgattattcacggtgttggtacaggtgcattgcgtcagggaattcaaaactat
ttgaaaaagcataagcgtgtaaaatccttccgttttggtgaagccggtgagggtggcttt
ggagtcacggttgtggaattgaaataa
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