Lysinibacillus pakistanensis: GDS87_23600
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Entry
GDS87_23600 CDS
T06280
Symbol
sigH
Name
(GenBank) RNA polymerase sporulation sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpak03021
]
GDS87_23600 (sigH)
Transcription machinery [BR:
lpak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GDS87_23600 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_Tnp_Tc3_1
HTH_16
HTH_38
Ribosomal_S21
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QGG53662
LinkDB
All DBs
Position
complement(4887784..4888431)
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AA seq
215 aa
AA seq
DB search
MFKNSIVQVTQDFERFNDEELIEMVHQGNTDALDYLITKYRLLVRAKARSYFLIGADKED
IVQEGMIGLYKAIRDFKGDKLASFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKP
IFDEESDRTLMDVLTGAIMDDPEELMIHREEFGYLEEKMSEILSELELQVLALYLDGQSY
HEISTKLNRHVKSIDNALQRVKRKLERHLVLEEMS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaatagcattgtacaagtgacacaagattttgaacgattcaatgatgaagaa
cttattgaaatggtgcatcaaggtaatacagatgcgttagattatttaattacgaaatac
cgtttgttagtaagagcgaaggcaagatcttattttttaattggagcagataaggaagac
attgtgcaagaaggtatgattggcttgtataaagcgatacgagactttaaaggagacaag
ctagcttcttttagagcatttgctgagctgtgtattacaaggcaaattattacagctatt
aaaactgcaactagacaaaagcatattccacttaattcttatgtatccttggacaagcca
atttttgatgaagaatcagatcgtacgttaatggatgtgttaacaggcgctattatggat
gatccggaagaattgatgattcatagagaagagtttggctatctagaagaaaagatgagt
gagattttaagtgaactagagctacaagtactagccttatacttagatggacaatcttat
catgagatttcgaccaaattaaatcgccatgtgaagtcgattgacaatgcactacaaaga
gtaaagcgtaaattagagaggcatttagtccttgaggaaatgtcctaa
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