Leeuwenhoekiella palythoae: LDL79_02035
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Entry
LDL79_02035 CDS
T07563
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lpal
Leeuwenhoekiella palythoae
Pathway
lpal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LDL79_02035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpal03400
]
LDL79_02035
DNA repair and recombination proteins [BR:
lpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LDL79_02035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
EFP
NARG2_C
Motif
Other DBs
NCBI-ProteinID:
UBZ10908
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All DBs
Position
487289..488065
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AA seq
258 aa
AA seq
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MRSIWNGSISFGLVSIPIKMYSGSEDRKLDLDMLDRHDNARIRYKRINEDTGKEVEWKDI
VKGFKQDDGYVVLEKEDFEQANLKKSKTIDIEEFIDEAEVADVLFKKPYFLEPQKEGGKS
YNLLRNALKKTKKLGVGTFVMRQKEHLSLVGVYNAALVLHVIRFEDEIRDPGELKLSKTK
VSKKEVDMAISLIENYTEAFDLTKYKDVYNDQLMKIIKSKSTGKVKEPQKFETKPTPAKD
LMAQLKASLEKKKKNKAS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaatttggaatggttcaattagttttggtttggtttccatacctataaaaatg
tattccggctcggaggaccgtaagttggatctagatatgctcgaccgccacgacaatgcg
cgtatacgctacaaacgcattaatgaagacactggaaaagaggtagaatggaaagatatt
gtcaaaggtttcaagcaggatgatggttatgtagtgcttgaaaaggaagactttgaacaa
gccaacctcaaaaaaagcaaaaccatcgatatcgaggaatttattgacgaggccgaagtt
gccgatgttctttttaaaaaaccttattttctcgaaccacagaaagaaggaggcaaatcg
tacaacctgctacgcaacgcattgaaaaaaactaaaaaattaggtgtgggtacatttgtg
atgcgtcaaaaagaacatcttagtctggtgggtgtttataacgctgctttggttttacac
gtgatcaggtttgaagacgagatacgcgatcctggagaacttaaattatctaaaactaaa
gtgagtaaaaaagaagtggatatggccatctcgctcattgaaaattacaccgaggccttt
gacttgaccaaatacaaagacgtatacaacgaccagttgatgaaaattattaagtcgaaa
tctaccggaaaagttaaagaacctcaaaaatttgaaactaaacccacacccgcaaaagat
ttaatggcacagctaaaagccagtcttgagaaaaagaaaaaaaacaaagcttcctga
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