Leeuwenhoekiella palythoae: LDL79_02965
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Entry
LDL79_02965 CDS
T07563
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpal03009
]
LDL79_02965
Enzymes [BR:
lpal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LDL79_02965
Ribosome biogenesis [BR:
lpal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LDL79_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UBZ11088
LinkDB
All DBs
Position
740099..741133
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AA seq
344 aa
AA seq
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MQDFKTEGPDEQDDELYEHYSFTAGKGQEPLRVDKFLMNFIEKATRNKIQQAAKNGNIQV
NGAVVKQNHKVKANDVVRVLFEHPPYEFLLTPEDIPLDIVYEDDTLLVVNKPAGMVVHPG
HGNYSGTLINALIYHFDNLPENSSGRPGLVHRIDKDTSGLLVVAKTEEAMTHLAKQFFDK
TSEREYIAIVWGNVEEDQGTVEGHIGRHPKNRMQNTVYEDGDQGKEAVTHYKVLERLGYV
TKISCKLETGRTHQIRVHMKHIGHTLFNDERYGGDVILKGTTFTKYKQFVENCFKVLPRQ
ALHAKTLGFEHPKTGEWLRFDSAIPEDMEACIEKWRSYAKHAME
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattttaagacggaaggtcctgatgagcaggatgatgaattgtatgaacattac
agctttaccgcaggcaaaggccaagagccgctgcgtgtagataaatttctgatgaatttt
attgaaaaagcaacgcgtaataaaattcagcaagccgcaaaaaatggaaacattcaagta
aacggagcagttgtaaagcaaaatcataaagtaaaagccaatgatgtggttcgggttctt
tttgaacatccaccctatgagtttttactcacgcctgaggatattccgcttgacattgtt
tatgaagatgacaccctgctggtggtgaataaacctgccggtatggtcgtacatcccggt
cacggtaattacagcggtacgcttattaatgcattgatctatcattttgataaccttccg
gaaaacagcagcggtagacccggtcttgtgcatcgtattgataaggacacaagcggactt
ctcgtagtcgcgaagactgaagaagcaatgacgcatcttgcgaagcagttttttgataaa
accagtgagcgtgaatacatagcgatcgtttggggaaatgtagaagaagatcaaggaacg
gtagaaggccatataggccgtcatcctaaaaatcgtatgcaaaatacggtttacgaagat
ggcgatcaaggtaaggaagcggtaacacattacaaggttttagaacgcttgggctatgtc
actaagatctcgtgcaagctcgaaaccgggcgcacgcatcagatacgtgtgcatatgaaa
cacattgggcacacgctgtttaacgacgagcgctatggcggcgatgtgatactaaaaggc
accacctttaccaagtacaagcaatttgtagaaaactgctttaaagtactccccagacaa
gccttacacgcaaaaactttaggctttgaacatcctaaaaccggtgagtggttgcgcttt
gacagtgcgatcccagaagatatggaagcctgtatcgaaaaatggcgcagttatgctaaa
cacgcaatggaatag
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