Leishmania panamensis: LPMP_240970
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Entry
LPMP_240970 CDS
T06539
Name
(RefSeq) replication factor C, subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
lpan
Leishmania panamensis
Pathway
lpan03030
DNA replication
lpan03410
Base excision repair
lpan03420
Nucleotide excision repair
lpan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPMP_240970
03410 Base excision repair
LPMP_240970
03420 Nucleotide excision repair
LPMP_240970
03430 Mismatch repair
LPMP_240970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_240970
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_240970
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LPMP_240970
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LPMP_240970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_22
Zeta_toxin
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_28
nSTAND3
AAA_assoc_2
AAA_18
NTPase_1
RNA_helicase
AAA_7
AAA_17
Motif
Other DBs
NCBI-GeneID:
22575506
NCBI-ProteinID:
XP_010699437
UniProt:
A0A088RS77
LinkDB
All DBs
Position
24:343668..345656
Genome browser
AA seq
662 aa
AA seq
DB search
MVTMSASSAADAAHPVTSRNELWADKYKPRSIAEMCYPVCANKLKAWLENFTPIGSPGDD
PKKPHGVLLSGSPGVGKTTTVYVVARELGRTVVEYNASDFRSRKSLRENVSDLINNRAFS
ARATSYTTVVLLMDEVDGCDIGGVGEVIEMLKSTRIPILCTCNDRWHPKLRSLLNYVEDM
RFSHPPCNVVANYLCDRVLAREGISLSKPLLQDIIKTSGSDIRSMLNNLQLWCLRRISLE
QRQLAECAAQSTKDSDAGLFDAAEYFLLQGTSRGERHSIAEMQARYYNADLVDMFVQENY
LHYNPQLVDGRDWMEAVSQAATSISRADAAQRIMYYEQNWSVSRFHVLSSSIAPCVYTRG
KYETFMTGQQKFFDMQRPVKFPTWLGHNSSANKNRRLLRCVAMQASHPAKGVSGNQEDVV
ADYMPHGWERPLTVPLATKGKDGIADVIASMDQYNLMRDDWDLVQTLPHYKHMQSPSSMA
PPVNIITAVKAAFTREFNKTHRFDSFAKSALKRGDEETQEDEEGGQGTGAGGNRKAGKVA
MAGVTVVSVTGNGAAVTKKKGKVAAGAATISTTAAATRKPRAKKSTPADGAARTIAKKAP
KSSTRVKAKASPATTNAKQKRARATSSESEESMSSLSSASSSSAPSSSSSSSSSSSDTSD
SE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgatgtctgcatcgtcggcggctgatgcggcgcaccccgtgacgagtcgcaac
gagctatgggcagacaagtacaagccacgctccattgctgagatgtgctacccggtctgt
gcgaacaagctgaaggcgtggctggagaacttcacacctatcggcagccccggcgatgac
ccaaagaagccgcatggtgtgctcctgtccggttctccaggcgtgggtaagacgacgaca
gtgtacgtggtggcacgggagctcggccgaacagttgtggagtacaacgcaagcgacttc
cgcagccgcaagtcgctcagggaaaacgtgtcggacctcatcaacaaccgtgcgttttcc
gcgagagccacatcgtacacaactgtggtgttgttaatggacgaggtggacggctgcgac
attggaggtgtcggcgaggtgattgagatgctcaagtccacccgcatcccgatcctgtgc
acctgtaacgatcgctggcaccccaaactgcgctcgctgctcaactacgtggaggacatg
cgctttagccacccgccgtgcaatgttgtggcgaactacctgtgtgaccgtgtcctggcg
cgcgaaggtatttcgttatccaagccgctcctgcaagatatcatcaagacctccggaagc
gatatccgcagcatgctcaacaatctgcagctctggtgtctgagacgcatctcgctcgag
cagcggcagcttgctgagtgcgccgcgcagtcaacgaaggacagcgatgccggcctcttc
gatgccgctgagtacttcttgctgcagggcacgtcgcgtggagagcggcactccatcgct
gagatgcaggcccgctactacaacgccgacctagtggacatgtttgtgcaggagaactat
ctgcactacaacccgcagctggtggatgggcgggattggatggaagccgtctcgcaggcc
gccacgtcgatctcgcgcgcggacgcggcgcagcgcattatgtactatgaacaaaattgg
tccgtatcccgcttccacgtcctgtcctccagcattgccccgtgtgtgtacacgcgcggc
aagtacgaaaccttcatgacagggcagcagaagttcttcgacatgcagcggcccgtgaag
ttcccgacgtggctcgggcacaactcctccgcaaacaagaaccgccgtctgctgcgctgt
gtcgccatgcaggcgtcacacccggcgaagggtgtgtcgggaaatcaggaggacgtggta
gcggactacatgccgcacggctgggagcgtccactgacggtgccgctggcaacgaaaggg
aaggacggcatcgccgacgtcatcgcctctatggatcagtacaacctcatgcgcgatgac
tgggacctcgtgcaaacgctgccgcactacaagcacatgcagtcgcccagctccatggcg
ccgccggtgaacatcatcaccgccgtcaaggccgccttcacacgtgagttcaacaagacg
caccgctttgacagcttcgcgaagagtgcgctaaagcgcggcgatgaggagacacaagaa
gacgaagagggcggacagggaaccggcgccggtggcaatcgcaaagctgggaaggtagcc
atggccggtgtaacagtcgtgagcgtcacgggcaatggcgctgccgtcacgaagaagaaa
ggcaaagtggctgctggcgctgccaccatctctacgacggcagccgcgacacgcaagcca
cgggccaagaagagcactccggctgatggtgctgccagaacgattgcaaagaaggcgccg
aagagctcgacgcgggtgaaagccaaggcatcaccggcgacaacaaacgcgaagcaaaag
cgcgcgcgcgcgacttcctcggagagtgaggagagcatgtcgtcattatcctcggcgtcc
tcctcgtctgcaccctcttcgagcagcagcagcagcagcagcagcagtgatacctccgac
agtgagtaa
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