Leishmania panamensis: LPMP_310210
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Entry
LPMP_310210 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LPMP_310210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_310210
Enzymes [BR:
lpan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
LPMP_310210
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LPMP_310210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
Motif
Other DBs
NCBI-GeneID:
22577447
NCBI-ProteinID:
XP_010701413
UniProt:
A0A088RWS8
LinkDB
All DBs
Position
31:complement(51679..53247)
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AA seq
522 aa
AA seq
DB search
MVALEREYVLGPFCELRIITSLSSTQLSKVTLRKPVDEDGASTATRAEVFGTELIPGVPV
HLPPGRSLSIFTSTGCTLLLVAPPAVLQRCYATSLGATWVRSVLDFHSHLERARVEARGR
EDVGPRVLFVSDRHHCGASTYVRWLSNFAVRLGYHPLLLDGVLDTPAFAFPGSMALFHAQ
HCMDIEEEMNLTPALYVQVGQSRVANPRLYQHWVQQLLPHGMEKMARSERCRVGGLFFDY
GVVEPHAVEQAEMAAAAAHSSNDPTASASPAPSALGSDKTQTNPLDTLLDTIVAADIDHV
CVVGSSWLRWKVVQRAWERFGGERSMDIVHAMLDPRWSVPQEVGCGGGQHFRLFLVDTVG
LVRSVPVTLWKRQRWLQYFFGTPTSPVKPTLVTLEASQVRIATVGAAAIDTMSTLLPMMD
SEDADRQKADVAAVSFITLQDVALKDRIVALSTATEYERGPDGELHSLSFSVFERSIRQG
TVLGFALVESVTPERLTLLVSGCPLDKELGLCFLLTEEELKS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtggctctggagcgggagtacgtcctcggccccttctgcgagctgcgcatcattaca
tcgctctcctcgactcagctgtcgaaggtgacgctgcgcaagccagtagacgaagatggc
gcttctactgcgacgcgagcagaggtgtttgggacggagttgatcccgggagtaccagtg
caccttccgccgggtcgctctctcagcattttcacgtccaccggctgcaccttgttacta
gtagccccaccggcggtgctgcagcgctgctacgcgacatcgctcggggcgacgtgggtg
cgctccgtgctcgattttcactcccacttggagcgggcacgagtggaggcccgtggccgc
gaagacgtcggtcctcgtgtactcttcgtgagtgaccggcaccactgcggggcaagcacc
tatgtccgctggcttagcaatttcgcggtgcgcctcggctaccaccccctgctactcgat
ggggtactggacacccccgccttcgcattccctggcagtatggcccttttccacgcccaa
cactgcatggacatcgaggaggagatgaatctgacaccggcgctgtatgtccaggtgggt
cagtcacgcgtggccaacccacgactttaccagcactgggtgcagcaactgctgccgcac
ggcatggagaagatggcgcgcagtgagcggtgccgcgtaggtgggctattctttgactat
ggcgtggtggagccgcacgcggtggagcaggcggaaatggcggcggcagcagcgcactca
agcaacgacccgaccgcctccgcctcccctgccccctccgcgctggggagcgataaaacg
cagacgaacccacttgacacccttctggacactattgtggccgccgacatcgaccacgtt
tgcgttgttggcagctcgtggctgcggtggaaggtggtgcagcgggcatgggaacgcttt
ggtggtgaaaggtcgatggacattgtgcacgcgatgcttgatccgcgctggagcgtgcca
caggaggtaggctgcggtggcggccagcacttcaggctctttctggtagacactgtgggg
ctcgtccgctcggtgcctgtgacgctgtggaaacgccagcgatggctgcagtacttcttc
ggcaccccgacctcgccggtaaagccgacgctcgtcacccttgaggcctcgcaggtgcgc
atcgcaaccgtcggtgcggcggcgatcgacaccatgtcgacactgctgccgatgatggac
agcgaggatgcagaccggcagaaggcggatgtggcagcggtgtcgttcattacgctgcag
gacgtcgccctgaaggaccgcattgttgccctcagcacagccactgagtacgagcgcggc
cctgacggggaacttcactcactttcttttagtgtgttcgagcgcagcatccggcagggg
actgtgctggggtttgcactcgtggaatccgtgacgccagagcgactcacgttgcttgtg
agtggctgcccgctcgacaaggagctgggcctttgcttccttctcacggaggaggagctg
aagagctga
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