Lacticaseibacillus paracasei subsp. paracasei: LBPC_1597
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Entry
LBPC_1597 CDS
T04768
Name
(GenBank) rRNA methylase
KO
K03437
RNA methyltransferase, TrmH family
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpap03016
]
LBPC_1597
Transfer RNA biogenesis [BR:
lpap03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LBPC_1597
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
BAN71893
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Position
complement(1683452..1684213)
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AA seq
253 aa
AA seq
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MEYISSPKNDRIKTAKKLTVKKHQKDAGRYLLEGRHLVQEALASGQTPYDIYATEKYVED
RALKPFYDKITQISESVSEHLSDTQTPQGIFAVMPRRAEQLPEPLSGQFLLLDAIQDPGN
VGTLVRTADAAGIQTVVFGNGTADAFGPKVLRAMQGSQFHVRIVSAKLMPIIKALHRGGI
PVYGSELNEKAKSYHSIQPSERFALIVGNEGNGMDPVLLQNTDTNLYIPIRGKAESLNVA
VAAAVMMFHLVGD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggaatatatttcatcacctaagaatgacagaatcaaaacagccaagaaactcacggtt
aaaaaacatcaaaaggatgctggccgctacttattagaaggccgtcacttggtccaagaa
gcacttgccagtggccagaccccttatgatatttatgcgaccgaaaagtatgttgaagat
cgtgcgctcaagccattttatgacaaaatcacacagatttctgaatccgtttctgagcat
ttaagcgacactcagaccccgcaaggcatttttgctgtgatgccgcgccgcgcagaacaa
ttgccagagccattgagtggtcagttcttattgttggatgcgattcaggacccgggtaac
gttgggaccttggtgcgaactgcagatgcagctgggattcaaacggtggtcttcggtaat
gggacagcggatgcgttcggtccaaaagtattacgtgcgatgcaaggcagtcaattccat
gtgcgcattgtctccgctaaattaatgccaattatcaaagccttacaccgtggcggcatc
ccagtttatggctcagaattaaatgaaaaagctaaaagttatcatagcattcaaccgagc
gaacgatttgccttaattgtgggcaatgaaggcaatggcatggatccagttttgttacaa
aataccgatacgaacctttacattccgatccggggcaaagctgaatcattgaatgtggcg
gttgctgcagcagtcatgatgtttcatttagtcggggattaa
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