Lacipirellula parvula: PLANPX_0537
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Entry
PLANPX_0537 CDS
T06590
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PLANPX_0537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpav03021
]
PLANPX_0537
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_0537
Enzymes [BR:
lpav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PLANPX_0537
Transcription machinery [BR:
lpav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PLANPX_0537
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PLANPX_0537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BBO30925
UniProt:
A0A5K7X3H4
LinkDB
All DBs
Position
621473..621730
Genome browser
AA seq
85 aa
AA seq
DB search
MIDALKEELIVNKVGGRFKLSALIQKRLAALNSGARPLVDLKTKFPMEIVIQEILQDKIM
LNADDSVRIVEQRRQGPMDFDLSQL
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgccctcaaagaagaactgatcgtcaacaaagtcggcggtcgcttcaagctt
tcggccctcatccagaagcgacttgctgcgttgaattcaggcgcccgcccgctcgtcgat
ctcaagacgaagtttccgatggaaatcgtcattcaagagatcttgcaagataagatcatg
ctgaacgccgacgacagcgttcgcatcgtcgagcagcgtcggcaagggccgatggacttc
gatctctcgcaactgtag
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