Lactiplantibacillus pentosus: BB562_04275
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Entry
BB562_04275 CDS
T05251
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpg
Lactiplantibacillus pentosus
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpg03400
]
BB562_04275
Enzymes [BR:
lpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB562_04275
DNA repair and recombination proteins [BR:
lpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BB562_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
AAA_16
ResIII
Peptidase_C4
AAA_22
DUF2059
PIF1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUI77969
UniProt:
A0A9N7E9M7
LinkDB
All DBs
Position
969625..973377
Genome browser
AA seq
1250 aa
AA seq
DB search
MSGATQYTASQQAVIKQQGNNLLVSASAGSGKTTVLIERIMRKILAGTNIDQLLVVTFTN
LAAKHMKQKLESQINKRISTLMAENPSETTASPVIRQLRQQLNLLGVANISTLDAFCLRI
IQRYYYVIDLDPVFRLLTDNTEGLLIRDQVWDAVREQLYKKDGAKFDLLTANFSNDRSDD
GLSRLIFRLFDFAQSTPAPQEWLDGLTKPYQIDDGPLTSSAFYQQQLLPLLEDNVDDMLQ
KLTQAQKIVTDFDLEPKSLDALQSVATTLTTLRDQLSTASWNELRAQINQFKVGRLKKTY
KDDPDKTAHAKAMGTLIDGIKKQMATLSERYFAAEEQQVLDIMVGAKAIVQELVKATSQF
STAFAAEKRRRHVLDFSDLEHLTLQILTSDNESGQAALNQLRAQFDEVMVDEYQDINSLQ
ESILQLLSRDEPGNMFMVGDVKQSIYQFRLADPLLFLHKYHDFADNPAHGDRIVLADNFR
SVANVDHLTNLIFSQLMDAPVGQIDYDEDAYLKYGPKDYPTDMPQTTNLLLYQTETDAPA
ELTQEDETNFSIDDSSVGSITMVAQKILALKAQDKPIYDRGEGTYRPFRYSDVALLVPTR
NHNLTIIDVFKRYHIPVVVNDAQNYFQTTEIRIMMSLLSIIDNPYQDIPLVAVLRSPIVG
LDENQLVYLRIQNKTSDYFQAVQDFYHQYPSGPATEYGDQVFAKIETFLKQLGDFRDLAR
RNQIVTLIWQIYEQTGFLDYVGGMPAGKQRQANLHALYERAYSYEQGSFKGLFQFVRFIR
RMQEKDQDLASAVAETDAEAVSVMTIHGSKGLEYPVIFVMDMDKQFNQTDTRSSALLDRQ
AGIGITYLDPETRVKYPTLPQIVTKQVVSQKMRAEEMRKLYVAITRAQQQLYLVGTIKDI
DTATEKWRQAFTSDGRVLSAQARVATTNQLDWVGMTLIRHPAMRDYWGDEWPSYELTGDP
TKFAIELGDATTIAADDTTTTTDEQLDAVQLVEQQVSIDVDHATREQLAALLNFHYPHQA
STTTTAYQSVSEVKRIFEDPDTPLMNANPTISRQRVRPTSRYVTGSLDLPQFLQTTQAPT
SAEVGSATHLVMEQLDVTKPVDEAAVQATIDDLVAKRVLTSPVADRIAVETVVAFYQSDL
GEQILAHPDKVHREVPFSLLIPARQIFDVDDQEDSKVLIHGIIDGYLETDDGLILFDYKT
DHVKQPADLKQRYAGQVKLYAEALNSMYRDTKVIQRYLYSLPQHVFVPVD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgcaacccagtacaccgcaagccaacaagcggtgatcaagcaacaaggcaat
aatttacttgtctcagcctcagctggttcggggaagacgacggttttaatcgagcgtatt
atgcgtaaaattttagccggaactaatatcgaccaattgctagtggtcacgttcacgaat
ttggctgctaagcatatgaaacaaaagttggaatcgcaaatcaacaagcggatttcgacg
ttgatggctgaaaatcctagtgaaacaacggcgtcaccagtaatccggcaattacggcaa
cagttgaatttgctaggggttgccaatattagcacgctggatgcgttctgtttacgcatc
attcaacgctactattacgtgattgatttagatcccgtgttccgattgttaacggataac
acggaaggactcttgattcgagaccaggtctgggatgcagtccgtgaacagttgtataaa
aaagacggcgcaaagtttgatttattgaccgcgaacttttcaaacgaccgcagtgatgat
gggctaagccggttgatttttcgactattcgactttgcgcaatcaacaccagcgccgcaa
gaatggctagatggtctgaccaaaccttatcagattgacgatggtccgttgacgagtagc
gcattttatcaacaacaactattaccactactagaagataatgttgatgacatgttacaa
aaattaacgcaagcgcagaaaatcgtcactgactttgacttagaaccgaagtcgctggat
gccttgcaaagcgtggcaaccacgttaacaaccttgcgtgaccagttatcgacagcaagt
tggaacgagttgcgagcgcaaatcaaccaattcaaagttggtcgacttaaaaagacgtat
aaagatgacccggacaagactgcccatgccaaagcaatgggcacactgattgatgggatt
aagaagcagatggcgacgcttagtgaacggtacttcgctgccgaagaacaacaagtctta
gatatcatggtcggtgccaaggcgattgttcaagaactggtgaaggcgacgagtcagttc
agcacggcatttgctgctgaaaaacgacgtcggcacgtcttggatttctctgacttggaa
catctgaccctacaaattcttacgagtgataatgagagtggtcaagccgctttaaatcaa
ttaagagctcagtttgatgaagtcatggttgacgaatatcaagatattaatagtttgcaa
gaatctattttgcagctgttgtcgcgtgatgaaccaggcaatatgttcatggtgggcgac
gtcaaacagtcaatttaccaattccgcttggcggatccgcttctgttcttacacaaatat
catgattttgccgataatccagcccatggcgatcgtatcgtgctagccgataacttccgg
tcagtggccaatgttgaccatttgaccaacctcatttttagtcagttgatggatgcaccg
gtcggacaaatcgactacgacgaggatgcttacctgaaatacgggccgaaagattatccg
accgatatgccgcagacgacgaatctgctgttgtaccagactgaaacggatgcgccagcg
gaactaactcaagaagacgagactaacttttcaatcgatgattcgtcagttggcagtatc
acgatggttgcgcaaaaaattctggcattaaaggcacaagataagccaatttatgatcgg
ggtgaggggacttatcgaccgtttcgttatagtgacgtcgccttactagttccaacccgt
aatcataatttgacgattattgacgtcttcaagcgttaccacatcccagtcgtcgttaac
gatgcacagaactattttcaaacgactgagattcgcatcatgatgtcgttactcagtatt
attgacaatccatatcaagatattccgttggtcgccgtgttgcggtcaccaatcgtcggt
cttgatgaaaatcagctcgtttatttgcggattcaaaataaaacgagtgactatttccaa
gccgttcaggacttttatcaccagtacccgagcggccccgcgactgaatatggggatcaa
gtctttgctaaaatcgaaacgtttttgaagcaactcggtgattttcgggacttagctcgc
cgcaaccaaatcgtgacgctgatttggcagatctatgagcaaactggtttcttggattac
gtgggcggcatgccagctggtaaacagcgacaagccaatttacacgccctatatgaacgg
gcgtacagttatgaacaggggagttttaaaggcctgttccaattcgttcggttcattcgg
cggatgcaagaaaaggatcaggatttagcgtcagcggtggcagagacggatgccgaggct
gttagtgtcatgacgattcatgggagtaaagggttggaatatcccgttatttttgtcatg
gatatggacaagcaatttaaccagaccgacacacggtccagtgcgttattggaccgacaa
gccggaatcgggattacttatctagatcctgagacacgggtcaaatacccgacgttgccg
cagattgtgacgaagcaagttgtgagccaaaagatgcgtgccgaagaaatgcgtaagtta
tacgtggccatcacgcgggcacaacaacagctctatttggtgggaaccatcaaggatatt
gatactgcaaccgaaaaatggcgacaggcgttcactagtgacggccgcgtgctcagtgca
caagcccgcgttgccaccaccaatcaactcgactgggtggggatgaccctgattcgtcac
cctgcgatgcgcgactattggggcgacgagtggccgagctatgaattgacaggagatccc
accaagtttgccatcgaattgggtgatgcgaccacgattgcggctgatgatacgaccaca
acgaccgatgaacagttagatgccgttcagttagtcgagcaacaagtcagtattgatgtc
gatcatgcaacgcgcgagcaactcgctgcgttgttgaatttccattatccacaccaggca
tcgacaacaacgacagcctatcagtcggtatcagaagtcaaacgaatctttgaagatcct
gacacgccgttgatgaatgcgaacccaacgatcagtcgccaacgcgttcgaccaacctcg
cgctacgtgacgggttcactagacttaccgcaattcctacagaccacacaagcgccaacc
agtgcggaggttgggagtgcgacccacttggtcatggaacaattagacgtgacgaaaccc
gtcgacgaagcagccgttcaggcaacgattgacgatttggtggcgaaacgagtactgaca
agtcccgtcgctgaccgaatcgctgttgagacggtggtcgcattctatcagagcgacctc
ggtgaacagattctcgcacatcctgataaggtccaccgtgaagtgccattttcgttgcta
attccggcacgtcaaattttcgatgtcgatgatcaagaggatagcaaagtcttaattcat
gggattattgacggctatttggagactgacgacggcttgattttgtttgattataagacg
gaccatgtcaaacaaccggctgacctcaaacaacgctatgcgggtcaggtcaagttgtat
gccgaagcgctgaattcaatgtatcgtgacacaaaagtcatccaacgctacttgtattcg
ttgccacagcatgtttttgtgccggtagattag
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